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Report for CCDS7979.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7979.1 Public Homo sapiens 11 OOSP2 24 110 108 CCDS HistoryNCBI Gene:219990Re-query CCDS DB by CCDS ID:7979.1Re-query CCDS DB by GeneID:219990See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7979.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000278855.7 ENSP00000278855.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000278855.7Link to Ensembl Protein Viewer:ENSP00000278855.2Re-query CCDS DB by Nucleotide ID:ENST00000278855Re-query CCDS DB by Protein ID:ENSP00000278855
Original member Current member NCBI NM_173801.5 NP_776162.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173801.5Link to Protein Sequence:NP_776162.2Re-query CCDS DB by Nucleotide ID:NM_173801Re-query CCDS DB by Protein ID:NP_776162Link to BLAST:NP_776162.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_776162.2 158 Q86WS3 158 100% 0 0

Chromosomal Locations for CCDS 7979.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 60040460 60040523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60043469 60043647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60044671 60044774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60046944 60047073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (477 nt):
ATGGCGTTAGAAGTCTTGATGCTCCTCGCTGTCTTGATTTGGACCGGTGCTGAGAACCTCCATGTGAAAA
TAAGTTGCTCTCTGGACTGGTTGATGGTCTCAGTTATCCCAGTTGCAGAAAGCAGAAATCTGTATATATT
TGCGGATGAATTACATCTGGGAATGGGCTGCCCTGCAAATCGGATACATACATATGTATATGAGTTTATA
TATCTTGTTCGTGATTGTGGCATCAGGACAAGGGTAGTTTCTGAGGAAACTCTCCTTTTTCAAACCGAGC
TGTACTTTACCCCAAGGAATATAGATCATGACCCTCAGGAAATCCATTTGGAGTGTTCCACCTCTAGGAA
ATCAGTGTGGCTTACACCAGTTTCTACTGAGAATGAAATAAAATTGGATCCTAGTCCTTTTATTGCTGAC
TTTCAGACAACAGCAGAAGAGTTAGGATTATTATCTTCTAGTCCAAACTTGCTCTGA

Translation (158 aa):
MALEVLMLLAVLIWTGAENLHVKISCSLDWLMVSVIPVAESRNLYIFADELHLGMGCPANRIHTYVYEFI
YLVRDCGIRTRVVSEETLLFQTELYFTPRNIDHDPQEIHLECSTSRKSVWLTPVSTENEIKLDPSPFIAD
FQTTAEELGLLSSSPNLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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