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Report for CCDS79745.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79745.1 Public Mus musculus 2 Zmynd19 23 108 98 CCDS HistoryNCBI Gene:67187Re-query CCDS DB by CCDS ID:79745.1Re-query CCDS DB by GeneID:67187See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79745.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000148042.2 ENSMUSP00000141788.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000148042.2Link to Ensembl Protein Viewer:ENSMUSP00000141788.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000148042Re-query CCDS DB by Protein ID:ENSMUSP00000141788
Original member Current member NCBI NM_147179.1 NP_671708.1 Accepted alive Link to Nucleotide Sequence:NM_147179.1Link to Protein Sequence:NP_671708.1Re-query CCDS DB by Nucleotide ID:NM_147179Re-query CCDS DB by Protein ID:NP_671708Link to BLAST:NP_671708.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_671708.1 188 Q9CQG3-2 188 100% 0 0

Chromosomal Locations for CCDS 79745.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 24952592 24952692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24953236 24953376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24958036 24958216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24958918 24959061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (567 nt):
ATGGAAGTAGATGCTGATGGAAATGGTGCTAAGATATTTGCATATGCCTTTGACAAAAACCGAGGAAGGG
GCTCTGGCAGGCTTCTACATGAGCTGCTGTGGGAACGACACAGGGGAGGTGTGGCTCCCGGGTTTCAGGT
GGTACATCTCAATGCTGTGACTGTGGACAATCGCCTGGACAACCTGCAGCTGGTACCATGGGGCTGGCGA
CCCAAAGCTGAAGAGACCTCCAGCAAACAAAGGGAGCAAAGCTTATACTGGCTTGCAATCCAGCAGCTTC
CCACAGACCCTATAGAAGAACAATTCCCTGTCTTGAATGTGACCCGGTACTATAATGCCAATGGGGATGT
GGTGGAAGAAGAAGAAAATTCCTGTACCTACTATGAGTGTCATTATCCTCCTTGTACGGTGATTGAAAAG
CAGCTTCGAGAGTTCAACATCTGTGGGCGTTGCCAGGTGGCTCGATACTGTGGCTCTCAGTGCCAGCAGA
AGGACTGGCCTGCCCACAAGAAGCACTGTCGGGAGAGGAAGCGTCCCTTCCAGCATGAGCTTGAGCCAGA
GCGATGA

Translation (188 aa):
MEVDADGNGAKIFAYAFDKNRGRGSGRLLHELLWERHRGGVAPGFQVVHLNAVTVDNRLDNLQLVPWGWR
PKAEETSSKQREQSLYWLAIQQLPTDPIEEQFPVLNVTRYYNANGDVVEEEENSCTYYECHYPPCTVIEK
QLREFNICGRCQVARYCGSQCQQKDWPAHKKHCRERKRPFQHELEPER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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