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Report for CCDS79202.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79202.1 Public Mus musculus 13 Zfp1008 23 108 98 CCDS HistoryNCBI Gene:211378Re-query CCDS DB by CCDS ID:79202.1Re-query CCDS DB by GeneID:211378See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79202.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000201563.3 ENSMUSP00000144207.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000201563.3Link to Ensembl Protein Viewer:ENSMUSP00000144207.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000201563Re-query CCDS DB by Protein ID:ENSMUSP00000144207
Original member Current member NCBI NM_173381.1 NP_775557.1 Accepted alive Link to Nucleotide Sequence:NM_173381.1Link to Protein Sequence:NP_775557.1Re-query CCDS DB by Nucleotide ID:NM_173381Re-query CCDS DB by Protein ID:NP_775557Link to BLAST:NP_775557.1

Chromosomal Locations for CCDS 79202.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 62605190 62605380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 62607373 62607499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 62624038 62624040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (321 nt):
ATGAATGCAGTGACTTATGAGGACGTGCATGTGAACTTCACTCAAGAGGAGTGGGCTCTGCTGGATCCTT
CTCAGAAGAAGCTCTACAAAGATGTCATGTTGGAGATCTACAGGAACCTCAGTGCTTTAGGTGTGAAAGG
AGTCAGAGTGCAGAGAAACCCTCTGAATATACTCAACGTGATAAAGCCTTTGCTTTACATGATCACAGTC
ATGCCCAAAGGCATGAAAGGGTTCATACAGAAAAGATCCCCTCTGAAGTTATTCACTGTGTCGAAGACTT
TTTACCTTACACAAGTCTCCAAGTCGATCAAAGAACACTAA

Translation (106 aa):
MNAVTYEDVHVNFTQEEWALLDPSQKKLYKDVMLEIYRNLSALGVKGVRVQRNPLNILNVIKPLLYMITV
MPKGMKGFIQKRSPLKLFTVSKTFYLTQVSKSIKEH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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