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Report for CCDS7900.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7900.1 Public Homo sapiens 11 COMMD9 24 110 108 CCDS HistoryNCBI Gene:29099Re-query CCDS DB by CCDS ID:7900.1Re-query CCDS DB by GeneID:29099See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7900.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263401.10 ENSP00000263401.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263401.10Link to Ensembl Protein Viewer:ENSP00000263401.5Re-query CCDS DB by Nucleotide ID:ENST00000263401Re-query CCDS DB by Protein ID:ENSP00000263401
Original member Current member NCBI NM_014186.4 NP_054905.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014186.4Link to Protein Sequence:NP_054905.2Re-query CCDS DB by Nucleotide ID:NM_014186Re-query CCDS DB by Protein ID:NP_054905Link to BLAST:NP_054905.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054905.2 198 Q9P000-1 198 100% 0 0

Chromosomal Locations for CCDS 7900.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 36274632 36274772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 36276137 36276240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 36277089 36277123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 36278477 36278616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 36280712 36280837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 36289362 36289412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (597 nt):
ATGGCTGCCCTGACAGCGGAGCATTTTGCAGCACTCCAGAGCCTGCTCAAGGCCTCCTCGAAAGATGTTG
TCAGACAGCTGTGTCAAGAAAGCTTTTCCAGTTCAGCCCTTGGCTTGAAAAAACTCTTGGATGTTACATG
TTCCAGCTTGTCTGTGACCCAGGAGGAGGCAGAGGAACTGCTCCAGGCTCTGCACCGCCTCACTAGGCTG
GTGGCATTCCGTGACCTGTCCTCTGCCGAGGCAATTCTGGCTCTCTTTCCAGAAAATTTCCACCAAAACC
TCAAAAACCTGCTGACAAAGATCATCCTAGAACATGTGTCTACTTGGAGAACCGAAGCCCAGGCAAATCA
GATCTCTCTGCCACGCCTGGTCGATCTGGACTGGAGAGTGGATATCAAAACCTCCTCAGACAGCATCAGC
CGCATGGCCGTCCCCACCTGCCTGCTCCAGATGAAGATCCAAGAAGATCCCAGCCTATGCGGAGACAAAC
CCTCCATCTCAGCTGTCACCGTGGAGCTGAGCAAAGAAACACTGGACACCATGTTAGATGGCCTGGGCCG
CATCCGAGACCAACTCTCTGCCGTGGCCAGTAAATGA

Translation (198 aa):
MAALTAEHFAALQSLLKASSKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEELLQALHRLTRL
VAFRDLSSAEAILALFPENFHQNLKNLLTKIILEHVSTWRTEAQANQISLPRLVDLDWRVDIKTSSDSIS
RMAVPTCLLQMKIQEDPSLCGDKPSISAVTVELSKETLDTMLDGLGRIRDQLSAVASK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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