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Report for CCDS77933.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77933.1 Public Homo sapiens 4 MRPS18C 24 110 108 CCDS HistoryNCBI Gene:51023Re-query CCDS DB by CCDS ID:77933.1Re-query CCDS DB by GeneID:51023See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77933.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000507349.5 ENSP00000426930.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000507349.5Link to Ensembl Protein Viewer:ENSP00000426930.1Re-query CCDS DB by Nucleotide ID:ENST00000507349Re-query CCDS DB by Protein ID:ENSP00000426930
Original member Current member NCBI NM_001297770.2 NP_001284699.1 Accepted alive Link to Nucleotide Sequence:NM_001297770.2Link to Protein Sequence:NP_001284699.1Re-query CCDS DB by Nucleotide ID:NM_001297770Re-query CCDS DB by Protein ID:NP_001284699Link to BLAST:NP_001284699.1

Chromosomal Locations for CCDS 77933.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 83456078 83456177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83456909 83456958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83460973 83461029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (207 nt):
ATGGCCGCTGTGGTTGCTGTTTGCGGTGGTCTAGGGAGGAAGAAGTTGACACACTTGGTAACGGCTGCTG
TCAGCCTTACACATCCCGGGACTCACACGGTGCTTTGGAGAAGAGGTTGTTCACAACAGGTATCCAGCAA
TGAGGACCTGGTCTTTGTGGGAAGAAACAGAAAGAAATCACAAAAGCAATTAAGAGAGCTCAAATAA

Translation (68 aa):
MAAVVAVCGGLGRKKLTHLVTAAVSLTHPGTHTVLWRRGCSQQVSSNEDLVFVGRNRKKSQKQLRELK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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