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Report for CCDS77477.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77477.1 Public Homo sapiens 2 WDSUB1 24 110 108 CCDS HistoryNCBI Gene:151525Re-query CCDS DB by CCDS ID:77477.1Re-query CCDS DB by GeneID:151525See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77477.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358147.8 ENSP00000350866.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358147.8Link to Ensembl Protein Viewer:ENSP00000350866.4Re-query CCDS DB by Nucleotide ID:ENST00000358147Re-query CCDS DB by Protein ID:ENSP00000350866
Original member Current member NCBI NM_001307994.2 NP_001294923.1 Accepted alive Link to Nucleotide Sequence:NM_001307994.2Link to Protein Sequence:NP_001294923.1Re-query CCDS DB by Nucleotide ID:NM_001307994Re-query CCDS DB by Protein ID:NP_001294923Link to BLAST:NP_001294923.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001294923.1 384 Q8N9V3-2 384 100% 0 0

Chromosomal Locations for CCDS 77477.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 159236033 159236190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159248372 159248512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159256196 159256375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159275546 159275638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159279761 159279945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159282672 159283069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGGTGAAACTGATTCACACATTAGCTGATCATGGTGACGATGTCAACTGCTGTGCCTTCTCCTTTTCCC
TCTTGGCTACTTGCTCCTTGGACAAAACAATTCGCCTGTACTCGTTACGTGACTTTACTGAACTGCCACA
TTCTCCATTGAAGTTTCATACCTATGCTGTCCACTGCTGCTGTTTCTCCCCTTCAGGACATATTTTGGCA
TCGTGTTCAACAGATGGTACCACTGTCCTATGGAATACTGAAAATGGACAGATGCTGGCAGTGATGGAAC
AGCCTAGTGGCAGCCCTGTGAGGGTTTGCCAGTTTTCCCCAGACTCCACGTGTTTGGCATCAGGGGCAGC
TGATGGAACTGTGGTTTTGTGGAATGCACAGTCATACAAATTATATAGATGTGGTAGTGTTAAAGATGGC
TCCTTGGCGGCATGTGCATTTTCTCCTAATGGAAGCTTCTTTGTCACTGGCTCCTCATGTGGTGATTTAA
CAGTGTGGGATGATAAAATGAGGTGTCTGCATAGTGAAAAAGCACATGATCTTGGAATTACCTGCTGCGA
TTTTTCTTCACAGCCAGTTTCTGATGGAGAACAAGGTCTTCAGTTTTTTCGACTGGCATCATGTGGTCAG
GATTGCCAAGTCAAAATTTGGATTGTTTCTTTTACCCATATCTTAGCAAGGCGCACAGAACATCAGCTGA
AGCAATTTACCGAAGATTGGTCAGAGGAGGATGTCTCAACATGGCTTTGTGCACAAGATTTAAAAGATCT
TGTTGGTATTTTCAAGATGAATAACATTGATGGAAAAGAACTGTTGAATCTTACAAAAGAAAGTCTGGCT
GATGATTTGAAAATTGAATCTCTAGGACTGCGTAGTAAAGTGCTGAGGAAAATTGAAGAGCTCAGGACCA
AGGTTAAATCCCTTTCTTCAGGAATTCCTGATGAATTTATATGTCCAATAACTAGAGAACTTATGAAAGA
TCCGGTCATCGCATCAGATGGCTATTCATATGAAAAGGAAGCAATGGAAAATTGGATCAGCAAAAAGAAA
CGTACAAGTCCCATGACAAATCTTGTTCTTCCTTCAGCGGTACTTACACCAAATAGGACTCTGAAAATGG
CCATCAATAGATGGCTGGAGACACACCAAAAGTAA

Translation (384 aa):
MVKLIHTLADHGDDVNCCAFSFSLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCCCFSPSGHILA
SCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLASGAADGTVVLWNAQSYKLYRCGSVKDG
SLAACAFSPNGSFFVTGSSCGDLTVWDDKMRCLHSEKAHDLGITCCDFSSQPVSDGEQGLQFFRLASCGQ
DCQVKIWIVSFTHILARRTEHQLKQFTEDWSEEDVSTWLCAQDLKDLVGIFKMNNIDGKELLNLTKESLA
DDLKIESLGLRSKVLRKIEELRTKVKSLSSGIPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKK
RTSPMTNLVLPSAVLTPNRTLKMAINRWLETHQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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