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Report for CCDS77363.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77363.1 Public Homo sapiens 19 ZFP28 24 110 108 CCDS HistoryNCBI Gene:140612Re-query CCDS DB by CCDS ID:77363.1Re-query CCDS DB by GeneID:140612See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77363.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000591844.5 ENSP00000468603.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591844.5Link to Ensembl Protein Viewer:ENSP00000468603.1Re-query CCDS DB by Nucleotide ID:ENST00000591844Re-query CCDS DB by Protein ID:ENSP00000468603
Original member Current member NCBI NM_001308440.2 NP_001295369.1 Accepted alive Link to Nucleotide Sequence:NM_001308440.2Link to Protein Sequence:NP_001295369.1Re-query CCDS DB by Nucleotide ID:NM_001308440Re-query CCDS DB by Protein ID:NP_001295369Link to BLAST:NP_001295369.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295369.1 349 Q8NHY6-2 349 100% 0 0

Chromosomal Locations for CCDS 77363.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 56539019 56539226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56539625 56539716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56547508 56547634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56547807 56547902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56548958 56549121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56550067 56550181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56550510 56550757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1050 nt):
ATGCGGGGGGCGGCGAGCGCGAGTGTCCGCGAGCCGACGCCGCTCCCGGGTAGAGGCGCCCCCCGCACAA
AGCCCCGGGCGGGCCGAGGCCCGACTGTAGGGACTCCAGCCACCTTGGCCCTCCCTGCCCGGGGAAGGCC
GCGCTCAAGGAATGGCCTCGCATCCAAAGGCCAGCGAGGAGCGGCCCCTACGGGGCCTGGGCACAGAGCT
CTGCCTTCCAGGGACACTGCTCTTCCCCAGGAGAGAAACAAGAAGCTGGAGGCTGTGGGGACAGGAATTG
AACCTAAAGCCATGTCCCAGGGCTTGGTGACATTTGGGGATGTGGCTGTAGATTTCTCCCAAGAGGAGTG
GGAGTGGCTGAACCCCATTCAGAGGAACTTGTACAGGAAGGTGATGTTGGAGAACTACAGGAACCTGGCA
TCGCTGGGACTTTGTGTTTCTAAGCCCGATGTGATCTCCTCGTTGGAACAAGGAAAAGAGCCTTGGACAG
TGAAGCGAAAGATGACAAGAGCCTGGTGCCCAGACTTGAAGGCTGTGTGGAAGATCAAGGAGTTACCTCT
CAAGAAGGACTTCTGCGAAGGAAAGCTATCCCAGGCAGTGATAACAGAGAGACTCACAAGCTATAATCTG
GAGTACTCTCTGTTAGGGGAACACTGGGATTATGATGCTCTGTTTGAGACACAGCCGGGCTTGGTGACTA
TCAAAAACCTGGCTGTTGACTTCCGCCAGCAGCTACACCCAGCTCAGAAGAATTTCTGTAAGAATGGGAT
ATGGGAGAACAACAGTGACCTGGGATCAGCAGGACATTGTGTGGCTAAGCCAGATTTAGTCTCTTTACTA
GAGCAAGAGAAGGAGCCCTGGATGGTGAAGCGAGAGCTGACAGGAAGCCTGTTCTCAGGTGAGTGCAGGA
GAGCCTGGTGTGGAAAATCTACTGCAAGAGAGAGCGGAGCTTTTACCAAAAAGGCTGCATCCTCACTAAT
ATACAGTAGGAAACTTTACCCAGGGTCTCTGGGTCTGGAAAGAAAATTGAACTCTGGGAGTTCCAAATAA

Translation (349 aa):
MRGAASASVREPTPLPGRGAPRTKPRAGRGPTVGTPATLALPARGRPRSRNGLASKGQRGAAPTGPGHRA
LPSRDTALPQERNKKLEAVGTGIEPKAMSQGLVTFGDVAVDFSQEEWEWLNPIQRNLYRKVMLENYRNLA
SLGLCVSKPDVISSLEQGKEPWTVKRKMTRAWCPDLKAVWKIKELPLKKDFCEGKLSQAVITERLTSYNL
EYSLLGEHWDYDALFETQPGLVTIKNLAVDFRQQLHPAQKNFCKNGIWENNSDLGSAGHCVAKPDLVSLL
EQEKEPWMVKRELTGSLFSGECRRAWCGKSTARESGAFTKKAASSLIYSRKLYPGSLGLERKLNSGSSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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