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Report for CCDS77190.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77190.1 Public Homo sapiens 18 DYNAP 24 110 108 CCDS HistoryNCBI Gene:284254Re-query CCDS DB by CCDS ID:77190.1Re-query CCDS DB by GeneID:284254See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77190.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000585973.1 ENSP00000466577.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000585973.1Link to Ensembl Protein Viewer:ENSP00000466577.1Re-query CCDS DB by Nucleotide ID:ENST00000585973Re-query CCDS DB by Protein ID:ENSP00000466577
Original member Current member NCBI NM_001307955.1 NP_001294884.1 Accepted alive Link to Nucleotide Sequence:NM_001307955.1Link to Protein Sequence:NP_001294884.1Re-query CCDS DB by Nucleotide ID:NM_001307955Re-query CCDS DB by Protein ID:NP_001294884Link to BLAST:NP_001294884.1

Chromosomal Locations for CCDS 77190.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 54587848 54587866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54591215 54591339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54597813 54598145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (477 nt):
ATGGAATACCAACTTCTAGATATAAAGGGCAATGAACAAATTGAAAAATATTCTTGGAGAGAAGCTTGTG
ATACTGGCAGCTCAAGAATGGACAGAAAGCATGGAAAATACATATTGAACGTTGAGCACTCTGAAAACCA
GCCGGTAAAAGAATATTGCCGCAATGACTGGTCTATGTGGAAAGTCTTCCTGGCTTGTCTCTTAGCCTGT
GTGATAATGACAGCAATTGGAGTACTTATAATATGCTTGGTGAATAACAAAGGATCGGCCAATTCCTCCA
TTGTTATCCAGCTATCCACAAATGATGGAGAGTGTGTGACTGTCAAACCTGGAACACCCTCTCCTGCTTG
TCCACCTACAATGACCACCACTTCAACTGTACCTGCAAGTACAGCCACTGAATCTACAACTTCAACAGCT
ACAGCTGCCACCACTTCCACAGAACCTATAACTGTTGCACCTACCGATCATTTATAA

Translation (158 aa):
MEYQLLDIKGNEQIEKYSWREACDTGSSRMDRKHGKYILNVEHSENQPVKEYCRNDWSMWKVFLACLLAC
VIMTAIGVLIICLVNNKGSANSSIVIQLSTNDGECVTVKPGTPSPACPPTMTTTSTVPASTATESTTSTA
TAATTSTEPITVAPTDHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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