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Report for CCDS77000.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77000.1 Public Homo sapiens 17 CCL4L2 24 110 108 CCDS HistoryNCBI Gene:9560Re-query CCDS DB by CCDS ID:77000.1Re-query CCDS DB by GeneID:9560See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77000.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000617405.5 ENSP00000483330.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000617405.5Link to Ensembl Protein Viewer:ENSP00000483330.1Re-query CCDS DB by Nucleotide ID:ENST00000617405Re-query CCDS DB by Protein ID:ENSP00000483330
Original member Current member NCBI NM_001291475.2 NP_001278404.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001291475.2Link to Protein Sequence:NP_001278404.1Re-query CCDS DB by Nucleotide ID:NM_001291475Re-query CCDS DB by Protein ID:NP_001278404Link to BLAST:NP_001278404.1

Chromosomal Locations for CCDS 77000.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 36211142 36211217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36211776 36211890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36212303 36212423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGAAGCTCTGCGTGACTGTCCTGTCTCTCCTCGTGCTAGTAGCTGCCTTCTGCTCTCTAGCACTCTCAG
CACCAATGGGCTCAGACCCTCCCACCGCCTGCTGCTTTTCTTACACCGCGAGGAAGCTTCCTCGCAACTT
TGTGGTAGATTACTATGAGACCAGCAGCCTCTGCTCCCAGCCAGCTGTGGTTGAGTGGAAGTTACAGGGA
GTCTGCTTCCAGTGCTGCTCCGGGAAGGATCCCATCCACCAGAGCTGCCCCACATGGACCATGGTCAGGC
AGAGGAAGATGCCTACCACAGGCAAGGGATAA

Translation (103 aa):
MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQPAVVEWKLQG
VCFQCCSGKDPIHQSCPTWTMVRQRKMPTTGKG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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