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Report for CCDS7607.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7607.1 Public Homo sapiens 10 NANOS1 24 110 108 CCDS HistoryNCBI Gene:340719Re-query CCDS DB by CCDS ID:7607.1Re-query CCDS DB by GeneID:340719See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7607.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000425699.3 ENSP00000393275.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000425699.3Link to Ensembl Protein Viewer:ENSP00000393275.1Re-query CCDS DB by Nucleotide ID:ENST00000425699Re-query CCDS DB by Protein ID:ENSP00000393275
Original member Current member NCBI NM_199461.4 NP_955631.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_199461.4Link to Protein Sequence:NP_955631.1Re-query CCDS DB by Nucleotide ID:NM_199461Re-query CCDS DB by Protein ID:NP_955631Link to BLAST:NP_955631.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_955631.1 292 Q8WY41 292 100% 0 0

Chromosomal Locations for CCDS 7607.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 119029802 119030680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGGAGGCTTTCCCCTGGGCGCCCCGCTCGCCCCGCCGCGGCCGCGCCCCCCCGCCCATGGCGCTCGTGC
CCAGCGCCCGCTACGTGAGCGCCCCGGGCCCGGCGCACCCGCAGCCCTTCAGCTCCTGGAACGACTACCT
GGGGCTCGCCACGCTCATCACCAAAGCGGTGGACGGCGAGCCGCGCTTCGGCTGCGCCCGCGGTGGGAAC
GGCGGCGGCGGCTCCCCGCCCTCCTCCTCCTCGTCGTCCTGCTGCTCCCCCCACACGGGGGCCGGGCCTG
GGGCGCTGGGGCCGGCGCTGGGGCCGCCCGACTACGACGAGGACGACGACGACGACAGCGACGAGCCGGG
GTCCCGGGGCCGCTACCTGGGGAGCGCGCTGGAATTGCGCGCGCTGGAGCTGTGCGCGGGCCCCGCCGAG
GCCGGGCTGCTGGAGGAGCGCTTCGCCGAGCTGAGCCCGTTCGCGGGTCGTGCCGCCGCCGTGCTGCTGG
GCTGCGCGCCCGCCGCCGCCGCCGCCGCCACCACCACCAGCGAGGCGACGCCGCGCGAGGAGCGGGCCCC
GGCGTGGGCGGCCGAGCCCCGGCTGCACGCGGCCTCCGGGGCGGCGGCCGCCCGGCTGCTGAAGCCCGAG
CTGCAGGTGTGCGTGTTCTGCCGGAACAACAAGGAGGCGATGGCGCTCTACACCACCCATATCCTCAAGG
GCCCCGACGGGCGAGTGCTGTGTCCCGTGCTGCGCCGCTACACGTGTCCCCTGTGCGGCGCCAGCGGCGA
CAACGCGCACACCATCAAGTACTGCCCGCTCTCCAAAGTGCCGCCGCCGCCCGCCCGCCCGCCGCCCCGC
AGCGCCAGGGACGGCCCGCCTGGCAAGAAGCTGCGCTGA

Translation (292 aa):
MEAFPWAPRSPRRGRAPPPMALVPSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVDGEPRFGCARGGN
GGGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRGRYLGSALELRALELCAGPAE
AGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTSEATPREERAPAWAAEPRLHAASGAAAARLLKPE
LQVCVFCRNNKEAMALYTTHILKGPDGRVLCPVLRRYTCPLCGASGDNAHTIKYCPLSKVPPPPARPPPR
SARDGPPGKKLR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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