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Report for CCDS75459.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75459.1 Public Homo sapiens 6 KLC4 24 110 108 CCDS HistoryNCBI Gene:89953Re-query CCDS DB by CCDS ID:75459.1Re-query CCDS DB by GeneID:89953See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75459.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000453940.6 ENSP00000395806.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000453940.6Link to Ensembl Protein Viewer:ENSP00000395806.2Re-query CCDS DB by Nucleotide ID:ENST00000453940Re-query CCDS DB by Protein ID:ENSP00000395806
Original member Current member NCBI NM_001289035.2 NP_001275964.1 Accepted alive Link to Nucleotide Sequence:NM_001289035.2Link to Protein Sequence:NP_001275964.1Re-query CCDS DB by Nucleotide ID:NM_001289035Re-query CCDS DB by Protein ID:NP_001275964Link to BLAST:NP_001275964.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001275964.1 542 Q9NSK0-5 542 100% 0 0

Chromosomal Locations for CCDS 75459.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 43061336 43061593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43065620 43065701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43066306 43066525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43066996 43067083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43070354 43070455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43070692 43070865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43071275 43071374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43071567 43071619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43071852 43071922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43072147 43072255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43072824 43072964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43073223 43073338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43073902 43073965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43074622 43074672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1629 nt):
ATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGG
GGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCT
GTCCCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCAG
CTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCTGAGTGAGGCCCAGGAGGAGAAAGAAGGCGATGCCA
CCAAGGATTCCCTGGATGACCTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGG
TCAAGGTGCTACAGCAGCTCAGCAGGGTGGATATGAGATCCCAGCAAGGTTGCGGACGTTGCACAACCTG
GTGATCCAGTACGCAGCCCAAGGTCGCTATGAGGTGGCCGTGCCACTCTGTAAGCAGGCACTAGAGGACC
TGGAGCGCACATCAGGCCGTGGCCACCCTGATGTCGCCACCATGCTCAACATCCTTGCTTTGGTGTATCG
TGACCAGAATAAGTATAAGGAAGCTGCCCACCTGCTGAATGATGCCCTTAGCATCCGGGAGAGCACCTTG
GGACCTGACCATCCTGCTGTGGCTGCCACACTCAACAATTTGGCTGTGCTCTATGGCAAAAGGGGCAAGT
ACAAGGAGGCAGAGCCTCTGTGCCAGCGGGCACTGGAGATTCGAGAAAAGGTCCTGGGCACGAATCATCC
AGATGTGGCAAAACAGCTGAACAACCTGGCCCTCTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGGAA
CGCTACTACCAGCGAGCACTGGCCATCTACGAGGGGCAGCTGGGGCCGGACAACCCTAATGTAGCCCGGA
CCAAGAACAACCTGGCTTCCTGTTACCTGAAACAGGGCAAATATGCTGAGGCTGAGACACTATACAAAGA
GATCCTGACCCGTGCCCATGTACAGGAGTTTGGGTCTGTGGATGATGACCACAAGCCCATCTGGATGCAT
GCAGAGGAGCGGGAGGAAATGAGCAAAAGCCGGCACCATGAGGGTGGGACACCCTATGCTGAGTATGGAG
GCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCACAGTGAACACTACTCTGAGAAACCTGGGAGCTCTGTA
TAGGCGCCAGGGAAAGCTGGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGGC
ACTGACCCTATCAGCCAGACGAAGGTGGCAGAGCTGCTTGGGGAGAGTGATGGTAGAAGGACCTCCCAGG
AGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGTGGCTGTGGAGTGGTCCGGGGA
TGGCAGTGGGACCCTGCAGAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGCTCCGCAGAAGCAGTGAA
CTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGCCTCCT
TGAACTATCTGAACCAACCTAGTGCAGCACCCCTCCAGGTCTCCCGGGGCCTCAGTGCCAGCACCATGGA
CCTCTCTTCAAGCAGCTGA

Translation (542 aa):
MSGLVLGQRDEPAGHRLSQEEILGSTRLVSQGLEALRSEHQAVLQSLSQTIECLQQGGHEEGLVHEKARQ
LRRSMENIELGLSEAQEEKEGDATKDSLDDLFPNEEEEDPSNGLSRGQGATAAQQGGYEIPARLRTLHNL
VIQYAAQGRYEVAVPLCKQALEDLERTSGRGHPDVATMLNILALVYRDQNKYKEAAHLLNDALSIRESTL
GPDHPAVAATLNNLAVLYGKRGKYKEAEPLCQRALEIREKVLGTNHPDVAKQLNNLALLCQNQGKYEAVE
RYYQRALAIYEGQLGPDNPNVARTKNNLASCYLKQGKYAEAETLYKEILTRAHVQEFGSVDDDHKPIWMH
AEEREEMSKSRHHEGGTPYAEYGGWYKACKVSSPTVNTTLRNLGALYRRQGKLEAAETLEECALRSRRQG
TDPISQTKVAELLGESDGRRTSQEGPGDSVKFEGGEDASVAVEWSGDGSGTLQRSGSLGKIRDVLRRSSE
LLVRKLQGTEPRPSSSNMKRAASLNYLNQPSAAPLQVSRGLSASTMDLSSSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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