NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS75012.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75012.1 Public Homo sapiens 3 TMEM108 24 110 108 CCDS HistoryNCBI Gene:66000Re-query CCDS DB by CCDS ID:75012.1Re-query CCDS DB by GeneID:66000See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75012.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000508711.5 ENSP00000424897.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000508711.5Link to Ensembl Protein Viewer:ENSP00000424897.1Re-query CCDS DB by Nucleotide ID:ENST00000508711Re-query CCDS DB by Protein ID:ENSP00000424897
Original member Current member NCBI NM_001282865.2 NP_001269794.1 Accepted alive Link to Nucleotide Sequence:NM_001282865.2Link to Protein Sequence:NP_001269794.1Re-query CCDS DB by Nucleotide ID:NM_001282865Re-query CCDS DB by Protein ID:NP_001269794Link to BLAST:NP_001269794.1

Chromosomal Locations for CCDS 75012.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 133229312 133229351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133390180 133390334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133395864 133395986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (318 nt):
ATGAAGAGAAGTTTACAGGCCCTCTATTGCCAACTGTTAACTGTCCTGCTGACGGTGTGCTGCATGAAGA
GGAAGAAGAAGACCGCCAACCCGGAGAACAACCTGAGCTACTGGAACAACACCATCACCATGGACTACTT
CAACAGGCATGCTGTGGAGCTGCCCAGGGAGATCCAGTCCCTTGAAACCTCTGAGGACCAGCTCTCAGAG
CCCCGCTCCCCAGCCAATGGCGACTATAGAGACACTGGGATGGTCCTTGTTAACCCCTTCTGTCAAGAAA
CACTGTTTGTGGGAAACGATCAAGTATCTGAGATCTAA

Translation (105 aa):
MKRSLQALYCQLLTVLLTVCCMKRKKKTANPENNLSYWNNTITMDYFNRHAVELPREIQSLETSEDQLSE
PRSPANGDYRDTGMVLVNPFCQETLFVGNDQVSEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH