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Report for CCDS74774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74774.1 Public Homo sapiens 21 SAMSN1 24 110 108 CCDS HistoryNCBI Gene:64092Re-query CCDS DB by CCDS ID:74774.1Re-query CCDS DB by GeneID:64092See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74774.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000619120.4 ENSP00000480850.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000619120.4Link to Ensembl Protein Viewer:ENSP00000480850.1Re-query CCDS DB by Nucleotide ID:ENST00000619120Re-query CCDS DB by Protein ID:ENSP00000480850
Original member Current member NCBI NM_001286523.2 NP_001273452.1 Accepted alive Link to Nucleotide Sequence:NM_001286523.2Link to Protein Sequence:NP_001273452.1Re-query CCDS DB by Nucleotide ID:NM_001286523Re-query CCDS DB by Protein ID:NP_001273452Link to BLAST:NP_001273452.1

Chromosomal Locations for CCDS 74774.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 14485912 14486114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 14498442 14498592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 14500529 14500735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 14510310 14510461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 14512444 14512573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 14516892 14516963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGAGAGCTATTTCATGGACAATGAAGAAAAAAGTGGGTAAAAAGTACATCAAAGCCCTTTCTGAGGAAA
AGGATGAGGAAGATGGAGAGAATGCCCACCCATATAGAAACAGTGACCCTGTGATTGGGACCCACACAGA
GAAGGTGTCCCTCAAAGCCAGTGACTCCATGGATAGTCTCTACAGTGGACAGAGCTCATCAAGTGGCATA
ACAAGCTGTTCAGATGGTACAAGTAACCGGGACAGCTTTCGACTGGATGACGATGGCCCCTATTCAGGAC
CATTCTGTGGCCGTGCCAGAGTGCATACGGATTTCACGCCAAGTCCCTATGACACTGACTCCCTCAAAAT
CAAGAAAGGAGACATCATAGACATTATTTGCAAAACACCAATGGGGATGTGGACAGGAATGTTGAACAAT
AAAGTGGGAAACTTCAAATTCATTTATGTGGATGTCATCTCAGAAGAGGAAGCAGCCCCCAAGAAAATAA
AGGCAAACCGAAGGAGTAACAGCAAAAAATCCAAGACTCTGCAGGAGTTCCTAGAGAGGATTCATCTGCA
GGAATACACCTCAACACTTTTGCTCAATGGTTATGAGACTCTAGAAGATTTAAAAGATATAAAAGAGAGT
CACCTCATTGAATTAAATATTGAAAACCCAGATGACAGAAGAAGGTTACTATCAGCTGCTGAAAACTTCC
TTGAAGAAGAAATTATTCAAGAGCAAGAAAATGAACCTGAGCCCCTATCCTTGAGCTCAGACATCTCCTT
AAATAAGTCACAGTTAGATGACTGCCCAAGGGACTCTGGTTGCTATATCTCATCAGGAAATTCAGATAAT
GGCAAAGAGGATCTGGAGTCTGAAAATCTGTCTGACATGGTACATAAGATTATTATCACAGAGCCAAGTG
ACTGA

Translation (304 aa):
MRAISWTMKKKVGKKYIKALSEEKDEEDGENAHPYRNSDPVIGTHTEKVSLKASDSMDSLYSGQSSSSGI
TSCSDGTSNRDSFRLDDDGPYSGPFCGRARVHTDFTPSPYDTDSLKIKKGDIIDIICKTPMGMWTGMLNN
KVGNFKFIYVDVISEEEAAPKKIKANRRSNSKKSKTLQEFLERIHLQEYTSTLLLNGYETLEDLKDIKES
HLIELNIENPDDRRRLLSAAENFLEEEIIQEQENEPEPLSLSSDISLNKSQLDDCPRDSGCYISSGNSDN
GKEDLESENLSDMVHKIIITEPSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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