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Report for CCDS74578.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74578.1 Public Homo sapiens 2 CCDC74A 24 110 108 CCDS HistoryNCBI Gene:90557Re-query CCDS DB by CCDS ID:74578.1Re-query CCDS DB by GeneID:90557See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74578.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000467992.6 ENSP00000444610.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000467992.6Link to Ensembl Protein Viewer:ENSP00000444610.2Re-query CCDS DB by Nucleotide ID:ENST00000467992Re-query CCDS DB by Protein ID:ENSP00000444610
Original member Current member NCBI NM_001258305.3 NP_001245234.1 Accepted alive Link to Nucleotide Sequence:NM_001258305.3Link to Protein Sequence:NP_001245234.1Re-query CCDS DB by Nucleotide ID:NM_001258305Re-query CCDS DB by Protein ID:NP_001245234Link to BLAST:NP_001245234.1

Chromosomal Locations for CCDS 74578.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 131527971 131528220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131529647 131529691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131530579 131530827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131531664 131531802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131532864 131532937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131533013 131533069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131533269 131533273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (819 nt):
ATGAGCGGTGCGGGGGTGGCGGCTGGGACGCGGCCCCCCAGCTCGCCGACCCCGGGCTCTCGGCGCCGGC
GCCAGCGCCCCTCTGTGGGCGTCCAGTCCTTGAGGCCGCAGAGCCCGCAGCTCAGGCAGAGCGACCCGCA
GAAACGGAACCTGGACCTGGAGAAAAGCCTGCAGTTCCTGCAGCAGCAGCACTCGGAGATGCTGGCCAAG
CTCCATGAGGAGATCGAGCATCTGAAGCGGGAAAACAAGGATCTCCATTACAAGCTCATAATGAATCAGA
CATCACAGAAGAAAGATGGCCCCTCAGGAAACCACCTTTCCAGGGCCTCTGCTCCCTTGGGCGCTCGCTG
GGTCTGCATCAACGGAGTGTGGGTAGAGCCGGGAGGACCCAGCCCTGCCAGGCTGAAGGAGGGCTCCTCA
CGGACACACAGGCCAGGAGGCAAGCGTGGGCGTCTTGCGGGCGGTAGCGCCGACACTGTGCGCTCTCCTG
CAGACAGCCTCTCCATGTCAAGCTTCCAGTCTGTCAAGTCCATCTCTAATTCAGGCAAGGCCAGGCCCCA
GCCCGGCTCCTTCAACAAGCAAGATTCAAAAGCTGACGTCTCCCAGAAGGCGGACCTGGAAGAGGAGCCC
CTACTTCACAACAGCAAGCTGGACAAAGTTCCTGGGGTACAAGGGCAGGCCAGCTGCGGCACCTCAAGTC
CCTCCTGGAAGGGAGCCAGAGGCCCCAGGCAGCCCCGGAGGAAGCTAGCTTTCCCAGGGACCAAGAAGCC
ACGCATTTCCCCAAGGTCTCCACCAAGAGCCTCTCCAAGAAATGCCTGA

Translation (272 aa):
MSGAGVAAGTRPPSSPTPGSRRRRQRPSVGVQSLRPQSPQLRQSDPQKRNLDLEKSLQFLQQQHSEMLAK
LHEEIEHLKRENKDLHYKLIMNQTSQKKDGPSGNHLSRASAPLGARWVCINGVWVEPGGPSPARLKEGSS
RTHRPGGKRGRLAGGSADTVRSPADSLSMSSFQSVKSISNSGKARPQPGSFNKQDSKADVSQKADLEEEP
LLHNSKLDKVPGVQGQASCGTSSPSWKGARGPRQPRRKLAFPGTKKPRISPRSPPRASPRNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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