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Report for CCDS74542.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74542.1 Public Homo sapiens 2 NEURL3 24 110 108 CCDS HistoryNCBI Gene:93082Re-query CCDS DB by CCDS ID:74542.1Re-query CCDS DB by GeneID:93082See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 74542.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000451794.6 ENSP00000478591.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000451794.6Link to Ensembl Protein Viewer:ENSP00000478591.1Re-query CCDS DB by Nucleotide ID:ENST00000451794Re-query CCDS DB by Protein ID:ENSP00000478591
Original member Current member NCBI NM_001285485.2 NP_001272414.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001285485.2Link to Protein Sequence:NP_001272414.1Re-query CCDS DB by Nucleotide ID:NM_001285485Re-query CCDS DB by Protein ID:NP_001272414Link to BLAST:NP_001272414.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001272414.1 262 Q96EH8 262 100% 0 0

Chromosomal Locations for CCDS 74542.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 96498244 96498446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96499378 96499449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96500439 96500924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96505259 96505286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (789 nt):
ATGGGTGCCCAGCTCTGCTTCGAGGCCAACGCCAAGGCGCCCCGAGAGGCACTTCGCTTCCATGCCGAGG
CCAAGGGCGCACAGGTGCGTCTGGACACGCGTGGCTGCATCGCGCACAGGCGCACCACGTTCCACGACGG
CATCGTGTTCAGCCAGCGGCCGGTGCGCCTGGGCGAGCGTGTGGCGCTGCGAGTGCTGCGGGAGGAGAGC
GGCTGGTGCGGCGGCCTCCGCGTGGGCTTCACGCGCCTGGACCCCGCGTGCGTGTCCGTGCCCAGCCTGC
CGCCCTTCCTGTGCCCCGACCTGGAGGAGCAGAGCCCGACGTGGGCGGCCGTGCTGCCTGAGGGCTGCGC
GCTCACTGGGGACTTGGTCCGCTTCTGGGTGGACCGCCGCGGCTGCCTCTTCGCCAAGGTCAACGCCGGC
TGCCGGCTCCTGCTGCGTGAGGGCGTGCCCGTCGGCGCCCCGCTCTGGGCCGTGATGGACGTGTATGGGA
CCACTAAGGCCATCGAGCTGCTGGATCCCACAGCCAGCCGGCTCCCAACACCCATGCCATGGGACCTCAG
CAACAAGGCTGTGCCTGAGCCCAAAGCCACACCAGGAGAGGAGTGTGCCATCTGCTTCTATCACGCTGCC
AACACCCGCCTTGTGCCCTGCGGCCACACATACTTCTGCAGATACTGTGCCTGGCGGGTCTTCAGCGATA
CGGCCAAGTGCCCTGTGTGCCGCTGGCAGATAGAGGCGGTAGCCCCTGCGCAGGGCCCTCCTGCTCTGAG
GGTTGAGGAAGGCTCATGA

Translation (262 aa):
MGAQLCFEANAKAPREALRFHAEAKGAQVRLDTRGCIAHRRTTFHDGIVFSQRPVRLGERVALRVLREES
GWCGGLRVGFTRLDPACVSVPSLPPFLCPDLEEQSPTWAAVLPEGCALTGDLVRFWVDRRGCLFAKVNAG
CRLLLREGVPVGAPLWAVMDVYGTTKAIELLDPTASRLPTPMPWDLSNKAVPEPKATPGEECAICFYHAA
NTRLVPCGHTYFCRYCAWRVFSDTAKCPVCRWQIEAVAPAQGPPALRVEEGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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