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Report for CCDS7445.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7445.1 Public Homo sapiens 10 CCNJ 24 110 108 CCDS HistoryNCBI Gene:54619Re-query CCDS DB by CCDS ID:7445.1Re-query CCDS DB by GeneID:54619See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7445.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265992.9 ENSP00000265992.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000265992.9Link to Ensembl Protein Viewer:ENSP00000265992.5Re-query CCDS DB by Nucleotide ID:ENST00000265992Re-query CCDS DB by Protein ID:ENSP00000265992
Original member Current member NCBI NM_019084.5 NP_061957.2 Accepted alive Link to Nucleotide Sequence:NM_019084.5Link to Protein Sequence:NP_061957.2Re-query CCDS DB by Nucleotide ID:NM_019084Re-query CCDS DB by Protein ID:NP_061957Link to BLAST:NP_061957.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061957.2 372 Q5T5M9-1 372 100% 0 0

Chromosomal Locations for CCDS 7445.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 96044394 96044462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96050256 96050466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96056701 96057000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96057121 96057247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96057830 96058241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1119 nt):
ATGGAGCTGGAGGGGCAGTGGTGGCGAGGACAGCTGGCCGCCGATATTCACCAAGCGCTTCGCTACAAGG
AGCTGAAGTTGCCCTCCTATAAAGGCCAGTCCCCTCAGTTAAGTCTCAGACGGTATTTTGCTGACTTGAT
TGCCATTGTGAGCAATCGCTTCACACTCTGCCCTTCTGCCCGCCATCTTGCTGTCTATTTACTGGACCTG
TTTATGGACCGCTATGACATCTCTATCCAGCAGCTGCATTTAGTTGCGCTTTCCTGCCTGCTTCTAGCAA
GTAAATTTGAAGAAAAAGAAGACAGTGTGCCTAAGCTGGAGCAGCTCAACAGCCTGGGTTGTATGACTAA
TATGAATCTAGTATTAACAAAACAAAATTTGCTACATATGGAACTATTATTATTAGAAACCTTTCAGTGG
AACCTCTGCCTTCCAACAGCCGCCCATTTCATTGAGTATTATCTCTCTGAAGCAGTACACGAAACAGATC
TTCATGACGGCTGGCCAATGATTTGCTTGGAAAAGACTAAACTCTACATGGCCAAATATGCAGATTACTT
CCTGGAAGTATCTTTGCAAGTAGCTGCTGCATGTGTGGCTTCTTCGAGGATTATACTTCGTCTTTCTCCA
ACGTGGCCTACAAGACTACATCGTCTTACTGCCTACTCTTGGGATTTCTTAGTGCAGTGTATTGAACGAC
TGTTGATCGCTCATGATAATGATGTGAAAGAAGCAAACAAACAGAGAGGGCAAGCAGGACCTCAGTCAGC
GCAACTAAGTGTATTCCAGACAGCCTCCCAGCCATCACGGCCAGTTCACTTTCAGCAACCTCAGTATCTC
CATCAGACACATCAGACCTCACTGCAGTATCGCCATCCTACGTCAGAACAACCAAGCTGTCAGCAGATTG
TATCGACCACACACACCTCATCTTACACACTACAGACATGTCCTGCTGGCTTCCAAACTAGTGTTCAGGG
CCTTGGGCACATGCAGACTGGTGTTGGGATGTCACTGGCAATACCAGTAGAAGTTAAGCCCTGTCTGAGT
GTTTCTTACAACCGGAGTTATCAGATAAATGAACATTACCCTTGTATTACTCCATGTTTTGAAAGGTGA

Translation (372 aa):
MELEGQWWRGQLAADIHQALRYKELKLPSYKGQSPQLSLRRYFADLIAIVSNRFTLCPSARHLAVYLLDL
FMDRYDISIQQLHLVALSCLLLASKFEEKEDSVPKLEQLNSLGCMTNMNLVLTKQNLLHMELLLLETFQW
NLCLPTAAHFIEYYLSEAVHETDLHDGWPMICLEKTKLYMAKYADYFLEVSLQVAAACVASSRIILRLSP
TWPTRLHRLTAYSWDFLVQCIERLLIAHDNDVKEANKQRGQAGPQSAQLSVFQTASQPSRPVHFQQPQYL
HQTHQTSLQYRHPTSEQPSCQQIVSTTHTSSYTLQTCPAGFQTSVQGLGHMQTGVGMSLAIPVEVKPCLS
VSYNRSYQINEHYPCITPCFER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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