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Report for CCDS74127.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74127.1 Public Homo sapiens 17 DCAF7 24 110 108 CCDS HistoryNCBI Gene:10238Re-query CCDS DB by CCDS ID:74127.1Re-query CCDS DB by GeneID:10238See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74127.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431926.7 ENSP00000402312.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431926.7Link to Ensembl Protein Viewer:ENSP00000402312.2Re-query CCDS DB by Nucleotide ID:ENST00000431926Re-query CCDS DB by Protein ID:ENSP00000402312
Original member Current member EBI ENST00000614556.5 ENSP00000483236.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000614556.5Link to Ensembl Protein Viewer:ENSP00000483236.1Re-query CCDS DB by Nucleotide ID:ENST00000614556Re-query CCDS DB by Protein ID:ENSP00000483236
Original member Current member EBI ENST00000686337.1 ENSP00000508930.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000686337.1Link to Ensembl Protein Viewer:ENSP00000508930.1Re-query CCDS DB by Nucleotide ID:ENST00000686337Re-query CCDS DB by Protein ID:ENSP00000508930
Original member Current member EBI ENST00000690417.1 ENSP00000509006.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000690417.1Link to Ensembl Protein Viewer:ENSP00000509006.1Re-query CCDS DB by Nucleotide ID:ENST00000690417Re-query CCDS DB by Protein ID:ENSP00000509006
Original member Current member EBI ENST00000690765.1 ENSP00000510085.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000690765.1Link to Ensembl Protein Viewer:ENSP00000510085.1Re-query CCDS DB by Nucleotide ID:ENST00000690765Re-query CCDS DB by Protein ID:ENSP00000510085
Original member Current member NCBI NM_005828.5 NP_005819.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005828.5Link to Protein Sequence:NP_005819.3Re-query CCDS DB by Nucleotide ID:NM_005828Re-query CCDS DB by Protein ID:NP_005819Link to BLAST:NP_005819.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005819.3 342 P61962-1 342 100% 0 0

Chromosomal Locations for CCDS 74127.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 63550678 63550815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63578470 63578628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63579337 63579448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63579825 63579943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63583502 63583711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63585211 63585328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63589000 63589172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1029 nt):
ATGTCCCTGCACGGCAAACGGAAGGAGATCTACAAGTATGAAGCGCCCTGGACAGTCTACGCGATGAACT
GGAGTGTGCGGCCCGATAAGCGCTTTCGCTTGGCGCTGGGCAGCTTCGTGGAGGAGTACAACAACAAGGT
TCAGCTTGTTGGTTTAGATGAGGAGAGTTCAGAGTTTATTTGCAGAAACACCTTTGACCACCCATACCCC
ACCACAAAGCTCATGTGGATCCCTGACACAAAAGGCGTCTATCCAGACCTACTGGCAACAAGCGGTGACT
ATCTCCGTGTGTGGAGGGTTGGTGAAACAGAGACCAGGCTGGAGTGTTTGCTAAACAATAATAAGAACTC
TGATTTCTGTGCTCCCCTGACCTCCTTTGACTGGAATGAGGTGGATCCTTATCTTTTAGGTACCTCAAGC
ATTGATACGACATGCACCATCTGGGGGCTGGAGACAGGGCAGGTGTTAGGGCGAGTGAATCTCGTGTCTG
GCCACGTGAAGACCCAGCTGATCGCCCATGACAAAGAGGTCTATGATATTGCATTTAGCCGGGCCGGGGG
TGGCAGGGACATGTTTGCCTCTGTGGGTGCTGATGGCTCGGTGCGGATGTTTGACCTCCGCCATCTAGAA
CACAGCACCATCATTTACGAAGACCCACAGCATCACCCACTGCTTCGCCTCTGCTGGAACAAGCAGGACC
CTAACTACCTGGCCACCATGGCCATGGATGGAATGGAGGTGGTGATTCTAGATGTCCGGGTTCCCTGCAC
ACCTGTCGCCAGGTTAAACAACCATCGAGCATGTGTCAATGGCATTGCTTGGGCCCCACATTCATCCTGC
CACATCTGCACTGCAGCGGATGACCACCAGGCTCTCATCTGGGACATCCAGCAAATGCCCCGAGCCATTG
AGGACCCTATCCTGGCCTACACAGCTGAAGGAGAGATCAACAATGTGCAGTGGGCATCAACTCAGCCCGA
CTGGATCGCCATCTGCTACAACAACTGCCTGGAGATACTCAGAGTGTAG

Translation (342 aa):
MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFDHPYP
TTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSS
IDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLE
HSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSC
HICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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