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Report for CCDS7297.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7297.1 Public Homo sapiens 10 AIFM2 24 110 108 CCDS HistoryNCBI Gene:84883Re-query CCDS DB by CCDS ID:7297.1Re-query CCDS DB by GeneID:84883See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7297.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307864.3 ENSP00000312370.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307864.3Link to Ensembl Protein Viewer:ENSP00000312370.1Re-query CCDS DB by Nucleotide ID:ENST00000307864Re-query CCDS DB by Protein ID:ENSP00000312370
Original member Current member EBI ENST00000373248.5 ENSP00000362345.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373248.5Link to Ensembl Protein Viewer:ENSP00000362345.1Re-query CCDS DB by Nucleotide ID:ENST00000373248Re-query CCDS DB by Protein ID:ENSP00000362345
Original member Current member EBI ENST00000613322.4 ENSP00000478931.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613322.4Link to Ensembl Protein Viewer:ENSP00000478931.1Re-query CCDS DB by Nucleotide ID:ENST00000613322Re-query CCDS DB by Protein ID:ENSP00000478931
Original member Current member NCBI NM_001198696.2 NP_001185625.1 Accepted alive Link to Nucleotide Sequence:NM_001198696.2Link to Protein Sequence:NP_001185625.1Re-query CCDS DB by Nucleotide ID:NM_001198696Re-query CCDS DB by Protein ID:NP_001185625Link to BLAST:NP_001185625.1
Original member Current member NCBI NM_032797.6 NP_116186.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032797.6Link to Protein Sequence:NP_116186.1Re-query CCDS DB by Nucleotide ID:NM_032797Re-query CCDS DB by Protein ID:NP_116186Link to BLAST:NP_116186.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001185625.1 373 Q9BRQ8-1 373 100% 0 0
NP_116186.1 373 Q9BRQ8-1 373 100% 0 0

Chromosomal Locations for CCDS 7297.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 70114178 70114329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70114920 70115120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70116622 70116774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70117812 70117920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70120507 70120599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70121092 70121211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70123405 70123520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70123907 70124084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1122 nt):
ATGGGGTCCCAGGTCTCGGTGGAATCGGGAGCTCTGCACGTGGTGATTGTGGGTGGGGGCTTTGGCGGGA
TCGCAGCAGCCAGCCAGCTGCAGGCCCTGAACGTCCCCTTCATGCTGGTGGACATGAAGGACTCCTTCCA
CCACAATGTGGCTGCTCTCCGAGCCTCCGTGGAGACAGGGTTCGCCAAAAAGACATTCATTTCTTACTCG
GTGACTTTCAAGGACAACTTCCGGCAGGGGCTAGTAGTGGGGATAGACCTGAAGAACCAGATGGTGCTGC
TGCAGGGTGGCGAGGCCCTGCCCTTCTCTCATCTTATCCTGGCCACGGGCAGCACTGGGCCCTTCCCGGG
CAAGTTTAATGAGGTTTCCAGCCAGCAGGCCGCTATCCAGGCCTATGAGGACATGGTGAGGCAGGTCCAG
CGCTCACGGTTCATCGTGGTGGTGGGAGGAGGCTCGGCTGGAGTGGAGATGGCAGCAGAGATTAAAACAG
AATATCCTGAGAAAGAGGTCACTCTCATTCACTCCCAAGTGGCCCTGGCTGACAAGGAGCTCCTGCCCTC
CGTCCGGCAGGAAGTGAAGGAGATCCTCCTCCGGAAGGGCGTGCAGCTGCTGCTGAGTGAGCGGGTGAGC
AATCTGGAGGAGCTGCCTCTCAATGAGTATCGAGAGTACATCAAAGTGCAGACGGACAAAGGCACAGAGG
TGGCCACCAACCTGGTGATTCTCTGCACCGGCATCAAGATCAACAGCTCCGCCTACCGCAAAGCGTTTGA
GAGCAGACTAGCCAGCAGTGGTGCTCTGAGAGTGAACGAGCACCTCCAGGTGGAGGGCCACAGCAACGTC
TACGCCATTGGTGACTGTGCCGACGTGAGGACGCCCAAGATGGCCTATCTTGCCGGCCTCCACGCCAACA
TCGCCGTGGCCAACATCGTCAACTCTGTGAAGCAGCGGCCTCTCCAGGCCTACAAGCCGGGTGCACTGAC
GTTCCTCCTGTCCATGGGGAGAAATGACGGTGTGGGCCAAATCAGTGGCTTCTATGTGGGCCGGCTCATG
GTTCGGCTGACCAAGAGCCGGGACCTGTTCGTCTCTACGAGCTGGAAAACCATGAGGCAGTCTCCACCTT
GA

Translation (373 aa):
MGSQVSVESGALHVVIVGGGFGGIAAASQLQALNVPFMLVDMKDSFHHNVAALRASVETGFAKKTFISYS
VTFKDNFRQGLVVGIDLKNQMVLLQGGEALPFSHLILATGSTGPFPGKFNEVSSQQAAIQAYEDMVRQVQ
RSRFIVVVGGGSAGVEMAAEIKTEYPEKEVTLIHSQVALADKELLPSVRQEVKEILLRKGVQLLLSERVS
NLEELPLNEYREYIKVQTDKGTEVATNLVILCTGIKINSSAYRKAFESRLASSGALRVNEHLQVEGHSNV
YAIGDCADVRTPKMAYLAGLHANIAVANIVNSVKQRPLQAYKPGALTFLLSMGRNDGVGQISGFYVGRLM
VRLTKSRDLFVSTSWKTMRQSPP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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