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Report for CCDS72875.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72875.1 Public Homo sapiens 1 POLR3GL 24 110 108 CCDS HistoryNCBI Gene:84265Re-query CCDS DB by CCDS ID:72875.1Re-query CCDS DB by GeneID:84265See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72875.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369314.2 ENSP00000358320.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369314.2Link to Ensembl Protein Viewer:ENSP00000358320.1Re-query CCDS DB by Nucleotide ID:ENST00000369314Re-query CCDS DB by Protein ID:ENSP00000358320
Original member Current member NCBI NM_032305.3 NP_115681.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032305.3Link to Protein Sequence:NP_115681.1Re-query CCDS DB by Nucleotide ID:NM_032305Re-query CCDS DB by Protein ID:NP_115681Link to BLAST:NP_115681.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115681.1 218 Q9BT43 218 100% 0 0

Chromosomal Locations for CCDS 72875.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 145974866 145974991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145975307 145975436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145977084 145977152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145977483 145977539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145977778 145977851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145977983 145978096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 145978361 145978447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (657 nt):
ATGGCCAGCCGGGGTGGGGGCCGGGGTCGTGGCCGGGGCCAGTTGACCTTCAACGTGGAGGCCGTGGGCA
TTGGGAAAGGGGATGCTTTGCCCCCACCCACCCTGCAGCCTTCTCCACTCTTCCCTCCCTTGGAGTTCCG
CCCAGTACCTTTGCCCTCAGGCGAGGAAGGGGAATATGTCCTGGCACTGAAGCAAGAGCTACGAGGAGCC
ATGAGGCAGCTCCCCTACTTCATCCGGCCAGCTGTCCCCAAGAGAGATGTGGAGCGTTATTCAGACAAAT
ATCAGATGTCAGGTCCGATTGACAATGCCATCGATTGGAACCCTGATTGGCGGCGTCTACCCCGGGAGCT
AAAGATCCGAGTGCGGAAGCTACAGAAGGAACGGATTACAATTCTGCTCCCCAAGAGGCCCCCTAAGACC
ACAGAAGATAAGGAGGAAACAATACAGAAACTAGAGACCCTGGAGAAGAAGGAAGAAGAAGTAACTTCAG
AGGAGGATGAGGAGAAAGAAGAAGAAGAAGAGAAGGAAGAGGAGGAAGAAGAAGAGTATGATGAAGAAGA
ACATGAAGAGGAAACTGATTACATCATGTCATATTTTGACAATGGAGAGGACTTTGGTGGTGACAGTGAT
GACAATATGGACGAGGCTATATACTGA

Translation (218 aa):
MASRGGGRGRGRGQLTFNVEAVGIGKGDALPPPTLQPSPLFPPLEFRPVPLPSGEEGEYVLALKQELRGA
MRQLPYFIRPAVPKRDVERYSDKYQMSGPIDNAIDWNPDWRRLPRELKIRVRKLQKERITILLPKRPPKT
TEDKEETIQKLETLEKKEEEVTSEEDEEKEEEEEKEEEEEEEYDEEEHEEETDYIMSYFDNGEDFGGDSD
DNMDEAIY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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