NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS72151.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72151.1 Public Mus musculus 8 Cngb1 23 108 98 CCDS HistoryNCBI Gene:333329Re-query CCDS DB by CCDS ID:72151.1Re-query CCDS DB by GeneID:333329See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72151.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000119870.8 ENSMUSP00000113827.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119870.8Link to Ensembl Protein Viewer:ENSMUSP00000113827.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000119870Re-query CCDS DB by Protein ID:ENSMUSP00000113827
Original member Current member NCBI NM_001195413.1 NP_001182342.1 Accepted alive Link to Nucleotide Sequence:NM_001195413.1Link to Protein Sequence:NP_001182342.1Re-query CCDS DB by Nucleotide ID:NM_001195413Re-query CCDS DB by Protein ID:NP_001182342Link to BLAST:NP_001182342.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182342.1 1325 E1AZ71 1325 100% 0 0

Chromosomal Locations for CCDS 72151.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 95241194 95241481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95242189 95242408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95248374 95248520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95248919 95249037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95251905 95251988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95252081 95252178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95253249 95253408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95254062 95254203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95257837 95257959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95259132 95259196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95260108 95260194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95260624 95260674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95263089 95263297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95264388 95264543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95265954 95266111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95267648 95267755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95270803 95270965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95277756 95277876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95278240 95278327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95284168 95284443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95286604 95286763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95293556 95293592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95295120 95295195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95296527 95296674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95297088 95297127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95297775 95297850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95298806 95298839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95299484 95299526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95299651 95299765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95300642 95300708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95300958 95301015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95303569 95303829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3978 nt):
ATGTTGGGCTGGGTCCAAAGGGTGCTGCCTCAGCCTCCGGGGACCCCTCAGAAGACCGTGGAGACAGCAG
GACCACAGCCAGAAACAGAGTCGAAACCAGAGGCCAACCCACAACCGGAGCCAGAACCTCAGCAGGAACC
AGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAA
CCTGAACCTGAACCAGTACCTGAAGAGGCTCCACCTGAGGTCCAGGCCCTGCCACCAGAGGAGCCAATGG
AAGGAGAGGGAGAGGCTGAGGCTGGTCCCAGCCTTCAAGAGACCCAGGTAGCTGACCCTGCTCAGCCCAC
CTCCCAGGCCCAGGTTGCTGTTGCCAAGGTGAACAGGCCCAGCTCCTGGATGTTGAGCTGGTTCTGGAGA
GGCATGCAGAAGGTCGTGCCACAGCCTGTCTGCAGCAATGGGGGCCAGAACCTGGCTGCCGGAGAGCGAG
ACCCAGATCAGGGTGGAGCACAGATCCCAGAACCTTGTGGCACTGGGGACCCAGGATCTGCAGAAGCTTC
CGGGACTCAGGACACTGAGCCCAGCCTTTGGCTGCTCAGGTGGCTTGAGCAGAATCTGGAAAAAGTGCTG
CCCCAGCCCCCTCCGCCTTCCCTGGCCTGGAAAGTTGAACCTGAGGCTGCTGTCTTGGATCCAGATCCTC
CAGGAACCCCTATGCAGATGGAGCCCACAGAGAGCCCCTCCCAGCCTAATCCTGGACCCCTGGAGCCTGA
GGAAGAGCCAGCTGCAGAGCCCCAGCCTGGCTTCCAATCCTCTTCCCTGCCACCACCCGGGGACCCCGTC
AGGCTGATTGAGTGGCTCCTACACAGACTGGAGATGGCCCTGCCTCAGCCCGTGCTCCATGGGAAGGCTG
CAGAGCAAGAGCCTGGCTGCCCTGGGATGTGTGACGTACAGACCATCAGCATCCTCCCCGTGGAACAGGT
GGAACATGATCTTGTCCTGGAGGAGGTGGACTCTTGCTGGGAGGATGCTCAGCAGGAAGATGGCGCCAGC
CCGCAGGAGACAGAGGTGGCTCCAGCTCATGAAGAAGAGAGTGAGGCCATAGTGGAGATACCCAGGGAGC
TGACGAAGATTCAAGAAGAAAGAGAAGATGAGCAGGAAGAGGATGAGGAAGAGAAGGAGGAAGAGAAGAA
GAAGGGGGAGGAAGAGAAGGAGAAGGAGGAGGAAGAGAAAGAGAAAGAGAAGGAGAAGGAGGAGGAGAAG
GAAGAGGAAGAGAAGGAGGAGGAGGAGGAGGAAGAAAAGGAAGAGGAAGAGGAGGAAAAGGAAGAAGAGG
AGAAGGAAGAGGAGGAGAAGGAAGAGGAGGAAGAAGAAGAGGAGGAGGAAGAAGAGCCTATTGTCCTGCT
GGATAGCTGTTTGGTGGTGCAGGCTGATGTGGACGAGTGCCAGCTAGAAAGGACACCGTCAGAGCTAGCA
TCGATCCAGGAGCTGCCAGAAGAGAAAGAGGAGAAGGAAGAGGAGAAGGAGGAGGAGAAAGAGGAGGAGG
AGGAAAAGAAGGAGGAAGAAGTGGAGAAGAAGGAGGAAGGGGAGGCCACAAACTCAACAGTACCAGCCAC
AAAGGAGCACCCGGAGCTCCAGGTAGAAGACACGGATGCTGATAGTGGCCCCCTCATCCCAGAGGAGACA
CTCCCTCCACCTGAGAGACCACCACCGTCTCCTGTCAAGTCGGACACCCTCACAGTTCCCGGCGCCGCTG
CAGCAGGCCACAGGAAGAAGCTACCTTCTCAGGATGATGAGGCCGAAGAGCTCAAGGCCCTGTCACCAGC
TGAGTCCCCAGTGGTTGCCTGGTCGGACCCCACCACCCCACAGGAGGCTGATGGCCAGGACCGAGCAGCC
TCCACCGCCAGCCAGAACAGTGCCATCATCAATGACCGGCTCCAGGAGCTGGTGAAGATGTTCAAGGAGC
GGACGGAGAAGGTGAAGGAGAAGCTCATTGACCCTGACGTCACCTCTGATGAGGAGAGCCCCAAGCCCTC
CCCGGCCAAGAAGGCCCCAGAACCAGACCCAGCCCAGAAGCCAGCGGAGGCAGAGGTGGCAGAGGAGGAA
CACTACTGCGACATGCTCTGCTGCAAGTTCAAGCGCAGGCCCTTGAAGATGTACCGGTTCCCCCAGAGTA
TCGACCCACTGACCAACCTCATGTACATCTTGTGGCTGTTCTTTGTGGTGCTGGCCTGGAACTGGAACTG
CTGGCTGATCCCTGTGCGCTGGGCCTTCCCGTACCAGCGGGCAGACAACATCCACTTCTGGCTCCTCATG
GATTACTTGTGCGACTTCATCTACCTCCTGGACATCACCGTGTTCCAGATGCGCCTGCAGTTTGTCAAAG
GCGGGGACATCATTACAGACAAGAAGGAGATGCGTAATAACTACCTGAAGTCTCGCCGGTTTAAGATGGA
CCTGCTCTGCCTCCTGCCCTTGGACTTTCTCTACTTGAAACTTGGCATCAACCCTCTCCTTCGCCTGCCC
CGCTGCCTGAAGTACATGGCCTTCTTTGAGTTTAATAACCGCCTGGAAGCCATCCTCAGCAAAGCCTACG
TTTACAGAGTCATCAGGACCACGGCCTACCTGCTGTACAGCCTGCACCTCAACTCCTGCCTTTACTACTG
GGCATCAGCCTTCCAGGGCATCGGCTCCACTCACTGGGTTTACGACGGAGTGGGGAACAGTTATATTCGA
TGCTACTACTGGGCTGTGAAAACCCTCATCACCATCGGAGGACTGCCCGACCCCCAGACGCTCTTTGAGA
TTGTCTTCCAGCTGCTGAACTATTTTACCGGGGTCTTTGCTTTCTCTGTGATGATTGGACAGATGAGAGA
TGTGGTGGGGGCCGCCACAGCGGGGCAGACCTACTACCGCAGCTGCATGGACAGCACAGTGAAGTACATG
AACTTCTACAAGATCCCCAGGTCTGTGCAGAACCGTGTCAAGACCTGGTATGAGTACACCTGGCATTCGC
AAGGCATGCTGGATGAGTCAGAGCTGATGGTACAACTTCCGGACAAGATGCGACTGGACCTGGCCATTGA
TGTGAACTACAGTATTGTCAGCAAAGTGGCCCTCTTTCAGGGCTGTGACCGGCAGATGATCTTCGACATG
CTCAAGCGGCTTCGTTCTGTTGTCTACCTACCCAATGACTATGTGTGCAAGAAGGGGGAGATTGGCCGAG
AGATGTACATTATCCAGGCGGGGCAGGTGCAGGTGCTGGGCGGCCCAGATGGGAAGGCTGTACTGGTGAC
ACTCAAAGCCGGATCGGTGTTTGGAGAAATAAGCTTGCTGGCTGTCGGGGGTGGCAACCGGCGCACAGCC
AACGTGGTGGCCCATGGCTTCACCAACCTCTTCATACTGGACAAGAAGGACTTGAATGAAATTTTAGTGC
ATTACCCGGAATCTCAGAAGTTACTTCGGAAGAAGGCCAGGCGCATGCTAAGAAATAACAACAAACCCAA
GGAGGAAAAGAGTGTGCTCATCCTGCCCCCGCGTGCGGGCACCCCGAAGCTCTTCAATGCTGCCCTGGCT
GCTGCAGGAAAGATGGGCCCCAGGGGAGCCAAGGGCGGCAAGCTCGCCCACCTGAGAGCCAGGCTCAAGG
AACTGGCTGCACTGGAGGCAGCCGCGCGACAGCAACAGCTGCTGGAACAGGCCAAGAGCTCGCAAGAAGC
TGGGGGAGAGGAGGGCTCTGGGGCCACAGACCAACCTGCACCCCAGGAGCCACCAGAGCCCAAGGACCCT
CCGAAGCCACCAGGGCCACCAGAGCCCTCAGCCCAGAGCTCTCCACCTCCAGCCTCAGCAAAGCCCGAGG
AAAGCACGGGGGAGGCAGCAGGGCCCCCGGAGCCCTCGGTGAGGATCCGTGTGAGTCCAGGCCCTGATCC
CGGGGAGCAGACACTGTCGGTGGAGGTGCTGGAGGAGAAGAAAGAGGGGGCGGAGTGA

Translation (1325 aa):
MLGWVQRVLPQPPGTPQKTVETAGPQPETESKPEANPQPEPEPQQEPEPEPEPEPEPEPEPEPEPEPEPE
PEPEPVPEEAPPEVQALPPEEPMEGEGEAEAGPSLQETQVADPAQPTSQAQVAVAKVNRPSSWMLSWFWR
GMQKVVPQPVCSNGGQNLAAGERDPDQGGAQIPEPCGTGDPGSAEASGTQDTEPSLWLLRWLEQNLEKVL
PQPPPPSLAWKVEPEAAVLDPDPPGTPMQMEPTESPSQPNPGPLEPEEEPAAEPQPGFQSSSLPPPGDPV
RLIEWLLHRLEMALPQPVLHGKAAEQEPGCPGMCDVQTISILPVEQVEHDLVLEEVDSCWEDAQQEDGAS
PQETEVAPAHEEESEAIVEIPRELTKIQEEREDEQEEDEEEKEEEKKKGEEEKEKEEEEKEKEKEKEEEK
EEEEKEEEEEEEKEEEEEEKEEEEKEEEEKEEEEEEEEEEEEPIVLLDSCLVVQADVDECQLERTPSELA
SIQELPEEKEEKEEEKEEEKEEEEEKKEEEVEKKEEGEATNSTVPATKEHPELQVEDTDADSGPLIPEET
LPPPERPPPSPVKSDTLTVPGAAAAGHRKKLPSQDDEAEELKALSPAESPVVAWSDPTTPQEADGQDRAA
STASQNSAIINDRLQELVKMFKERTEKVKEKLIDPDVTSDEESPKPSPAKKAPEPDPAQKPAEAEVAEEE
HYCDMLCCKFKRRPLKMYRFPQSIDPLTNLMYILWLFFVVLAWNWNCWLIPVRWAFPYQRADNIHFWLLM
DYLCDFIYLLDITVFQMRLQFVKGGDIITDKKEMRNNYLKSRRFKMDLLCLLPLDFLYLKLGINPLLRLP
RCLKYMAFFEFNNRLEAILSKAYVYRVIRTTAYLLYSLHLNSCLYYWASAFQGIGSTHWVYDGVGNSYIR
CYYWAVKTLITIGGLPDPQTLFEIVFQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYM
NFYKIPRSVQNRVKTWYEYTWHSQGMLDESELMVQLPDKMRLDLAIDVNYSIVSKVALFQGCDRQMIFDM
LKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKAVLVTLKAGSVFGEISLLAVGGGNRRTA
NVVAHGFTNLFILDKKDLNEILVHYPESQKLLRKKARRMLRNNNKPKEEKSVLILPPRAGTPKLFNAALA
AAGKMGPRGAKGGKLAHLRARLKELAALEAAARQQQLLEQAKSSQEAGGEEGSGATDQPAPQEPPEPKDP
PKPPGPPEPSAQSSPPPASAKPEESTGEAAGPPEPSVRIRVSPGPDPGEQTLSVEVLEEKKEGAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH