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Report for CCDS71452.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71452.1 Public Mus musculus 4 Kif2c 23 108 98 CCDS HistoryNCBI Gene:73804Re-query CCDS DB by CCDS ID:71452.1Re-query CCDS DB by GeneID:73804See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71452.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106436.7 ENSMUSP00000102044.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106436.7Link to Ensembl Protein Viewer:ENSMUSP00000102044.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106436Re-query CCDS DB by Protein ID:ENSMUSP00000102044
Original member Current member NCBI NM_001290662.1 NP_001277591.1 Accepted alive Link to Nucleotide Sequence:NM_001290662.1Link to Protein Sequence:NP_001277591.1Re-query CCDS DB by Nucleotide ID:NM_001290662Re-query CCDS DB by Protein ID:NP_001277591Link to BLAST:NP_001277591.1

Chromosomal Locations for CCDS 71452.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 117160167 117160382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117162010 117162114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117162213 117162318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117162603 117162670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117165142 117165252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117165358 117165562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117166312 117166454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117166881 117166972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117167049 117167112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117167294 117167384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117169835 117169997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117170085 117170139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117171717 117171812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117172285 117172385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117173602 117173721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117174886 117175008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117177921 117177969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117178145 117178246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117178401 117178403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2013 nt):
ATGATTGACATTGACGATGTGGCTGCAATAAACCCAGAGCTCCTACAGCTTCTTCCCTTACGACCGAAGG
ACAGTCTGCCACTGCAGGAAAACGTAACGGTCCCGAAGCAAAAACGCAAATCAGTCAACTCCAAAATTCC
AGCTCTAAAAGAAGGCCTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAAGTTCGAATCCCTGCT
CAGGAGAATGAAATGGAGGTGGAGCTGCCTGTGCCTACAAACTCTCGCAAGCAGTTTGCCATTCCCAGCC
ACCCTCGGGCCTCCTGCTCCACAGTGACAGAATTGCCGTTGTTGATGGTCAGTGAGGAGGCAGAAGAGCA
AGCCCACTCCACCCGCAGTACCTCATCTGCAAACCCTGGGAACTCAGTTCGGAGGAAATCGTGTATCGTG
AAGGAGATGGAGAAAATGAAGAACAAGCGTGAAGAGAAGAGGGCCCAGAACTCGGAGCTAAGAATAAAGC
GAGCACAGGAATATGACAGCAGCTTTCCAAACTGGGAATTTGCCCGGATGATCAAAGAATTTCGGGTTAC
TATGGAATGTAGCCCGCTTACTGTGACAGACCCTATCGAAGAGCACAGGATCTGTGTCTGTGTCAGGAAA
CGCCCACTGAATAAACAAGAACTGGCCAAGAAAGAAATCGATGTGATTTCTGTTCCCAGCAAGTGTCTCC
TCCTGGTGCATGAACCCAAGTTAAAAGTGGACTTAACGAAGTACCTGGAGAACCAAGCTTTCTGCTTTGA
CTTTGCATTTGATGAGACAGCTTCCAATGAAGTTGTCTACAGGTTCACAGCAAGGCCACTGGTACAGACG
ATTTTTGAAGGGGGAAAAGCAACATGCTTTGCCTATGGACAGACAGGCAGTGGGAAGACACATACAATGG
GTGGAGATCTGTCTGGTAAAAGTCAGAACGCATCTAAAGGGATCTACGCCATGGCTTCCCGGGATGTCTT
CCTTCTGAAGAACCAGCCTCGGTACCGGAACTTAAACCTGGAAGTTTATGTGACATTCTTCGAGATCTAC
AATGGGAAGGTGTTTGATCTGCTCAACAAAAAGGCCAAGTTACGTGTGCTGGAGGACAGCAGGCAGCAGG
TGCAGGTTGTGGGACTGCAGGAGTACCTGGTCACCTGTGCTGATGATGTCATCAAGATGATCAACATGGG
CAGTGCCTGCAGGACTTCTGGACAAACATTTGCCAACTCCAATTCCTCCCGCTCCCACGCCTGCTTCCAG
ATTCTTCTTCGAACTAAAGGGAGATTACATGGCAAATTCTCTTTGGTGGATCTGGCAGGGAATGAACGAG
GGGCCGACACATCTAGTGCTGACCGGCAGACTCGCATGGAGGGAGCAGAAATTAACAAGTCTCTCCTGGC
TCTGAAGGAGTGCATCCGGGCGCTGGGACAGAACAAGGCTCACACCCCGTTCCGTGAGAGCAAGCTGACC
CAGGTGCTGAGGGACTCGTTCATTGGGGAGAACTCGAGGACCTGCATGATCGCCATGATCTCACCAGGCA
TAAGCTCCTGTGAATACACCTTAAACACGCTGAGATACGCAGACAGAGTCAAGGAGCTAAGCCCCCACAG
CGGACCCAGTGGAGAGCAGCCGGTTCAGATGGAAACAGAAGTGATGGAAGCCAGCTCTAATGGGACGTCT
CTGACTGGCAATGAAGAGGAGGAGCTGTCTTCCCAGATGTCCAGCTTTAATGAAGCCATGACTCAGATCA
GGGAGCTGGAAGAGAGGGCCCTGGAAGAGCTCAGAGAGATCATACAGCAAGGACCAAACTGGCTTGAGCT
CTCCGAGATGACAGATCAGCCAGACTATGACTTGGAGACCTTTGTGAACAAAGCAGAATCTGCCCTGACA
CAGCAGGCTAAGCAGGCGAAGCACTTCTCAGCCCTTCGAGAAGTCATCAAGGCCCTGCGCCTAGCCATGC
AACTGGAAGAACAGGCTAGCAAACAAATAAACAGCAAGAAACGGCACCAATGA

Translation (670 aa):
MIDIDDVAAINPELLQLLPLRPKDSLPLQENVTVPKQKRKSVNSKIPALKEGLRSRSTRMSTVSEVRIPA
QENEMEVELPVPTNSRKQFAIPSHPRASCSTVTELPLLMVSEEAEEQAHSTRSTSSANPGNSVRRKSCIV
KEMEKMKNKREEKRAQNSELRIKRAQEYDSSFPNWEFARMIKEFRVTMECSPLTVTDPIEEHRICVCVRK
RPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQT
IFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIY
NGKVFDLLNKKAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQ
ILLRTKGRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLT
QVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELSPHSGPSGEQPVQMETEVMEASSNGTS
LTGNEEEELSSQMSSFNEAMTQIRELEERALEELREIIQQGPNWLELSEMTDQPDYDLETFVNKAESALT
QQAKQAKHFSALREVIKALRLAMQLEEQASKQINSKKRHQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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