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Report for CCDS70695.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70695.1 Public Mus musculus 16 Gnb1l 23 108 98 CCDS HistoryNCBI Gene:13972Re-query CCDS DB by CCDS ID:70695.1Re-query CCDS DB by GeneID:13972See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70695.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115601.7 ENSMUSP00000111264.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115601.7Link to Ensembl Protein Viewer:ENSMUSP00000111264.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000115601Re-query CCDS DB by Protein ID:ENSMUSP00000111264
Original member Current member NCBI NM_001285494.1 NP_001272423.1 Accepted alive Link to Nucleotide Sequence:NM_001285494.1Link to Protein Sequence:NP_001272423.1Re-query CCDS DB by Nucleotide ID:NM_001285494Re-query CCDS DB by Protein ID:NP_001272423Link to BLAST:NP_001272423.1

Chromosomal Locations for CCDS 70695.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 18540451 18540575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 18540972 18541097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 18544111 18544273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 18548093 18548191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 18552409 18552582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 18564035 18564286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGCAGCCCTGTTCCCACCACCGCCTGGTCCCAGATTTGTCCTCCGAGGCACACAGTCGGCTGTGAACA
CGCTCCATTTCTGCCCACCATCCCAAGCTGCAGGGAACCCACTTCTCTTCTCAGGGTCTCAGAATGGCCT
AGTACATATCTGGAGCCTACAAACAAGAAGAATAGTTACCACTCTAAATGGCCATGGGGGCCAGGGTGTA
ATCTGGCTGAAGACACTGCCACAGGGACACCAGCTCCTCAGCCAGGGTCGAGACCTGCGGCTGTGCCTGT
GGGACCTGGAGGAGGGCAGGAACACCATCATGGACTCAGTTCAGCTGGACAGTGTGGGCTTCTGCAGGGG
CTCCATCCTGGTCAGGGGACAGCAGTGCTGGATGCTTGCTGTGCCAGGGAAGGGCAGCGACGAGGTTCAG
ATTCTGGAGATGCCATCCAAGACGTCAGTGTGCACCCTGAAGCCGGAGGCCGATGCCAGGCCAGGCATGC
CCATGTGCCTGGGGCTGTGGCAGGATGGATCAGTAACCCTGTGGGACATCTCAGAGCGGAAGGTGTGCAG
CCAAATCACCTGCCATGAAGAGCCTGTCATGGGCCTCGACTTCGACTCTCAGAAGGCCAAGGGCATCTCT
GGCTCTGCTGGGAAGGTACTGGCTGTCTGGAGTCTGGACGATCAGCAGTCCCTGCAGGTGAAGAAGACTC
ATGAACTCACCAATCCTGGAATTGCCGAAGTCACCATCCGGCCAGACCACAAGATCTTAGCCACAGCAGG
CTGGGACCATCGCATCCGTGTGTTTCACTGGAGGACAATGAAACCGTTAGCTGTTCTGGCTTTCCACAGC
GCTCCTGTGTACTGCGTGGCCTTTGCTGCTGATGGCTTGCTTGCTGCGGGGTCCAAGGACCAGCGTATCA
GCATCTGGTCACTCTACCCCTGCCCATGA

Translation (312 aa):
MAALFPPPPGPRFVLRGTQSAVNTLHFCPPSQAAGNPLLFSGSQNGLVHIWSLQTRRIVTTLNGHGGQGV
IWLKTLPQGHQLLSQGRDLRLCLWDLEEGRNTIMDSVQLDSVGFCRGSILVRGQQCWMLAVPGKGSDEVQ
ILEMPSKTSVCTLKPEADARPGMPMCLGLWQDGSVTLWDISERKVCSQITCHEEPVMGLDFDSQKAKGIS
GSAGKVLAVWSLDDQQSLQVKKTHELTNPGIAEVTIRPDHKILATAGWDHRIRVFHWRTMKPLAVLAFHS
APVYCVAFAADGLLAAGSKDQRISIWSLYPCP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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