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Report for CCDS70210.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70210.1 Public Mus musculus 11 Gas7 23 108 98 CCDS HistoryNCBI Gene:14457Re-query CCDS DB by CCDS ID:70210.1Re-query CCDS DB by GeneID:14457See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70210.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041611.11 ENSMUSP00000038420.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041611.11Link to Ensembl Protein Viewer:ENSMUSP00000038420.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000041611Re-query CCDS DB by Protein ID:ENSMUSP00000038420
Original member Current member EBI ENSMUST00000108680.1 ENSMUSP00000104320.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108680.1Link to Ensembl Protein Viewer:ENSMUSP00000104320.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108680Re-query CCDS DB by Protein ID:ENSMUSP00000104320
Original member Current member EBI ENSMUST00000108681.7 ENSMUSP00000104321.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108681.7Link to Ensembl Protein Viewer:ENSMUSP00000104321.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108681Re-query CCDS DB by Protein ID:ENSMUSP00000104321
Original member Current member NCBI NM_001277079.1 NP_001264008.1 Accepted alive Link to Nucleotide Sequence:NM_001277079.1Link to Protein Sequence:NP_001264008.1Re-query CCDS DB by Nucleotide ID:NM_001277079Re-query CCDS DB by Protein ID:NP_001264008Link to BLAST:NP_001264008.1

Chromosomal Locations for CCDS 70210.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 67603117 67603228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67629610 67629690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67643281 67643366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67652859 67652912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67660019 67660108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67662051 67662166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67665388 67665462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67670594 67670672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67674238 67674366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67675599 67675722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67681225 67681304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67682635 67682733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67683338 67683451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1239 nt):
ATGGTCCCCCCTCCGCCAGGAGAGGAGAGCCAGACGGTCATCCTTCCACCCGGCTGGCACAGCTACTTGT
CTCCTCAGGGCCGCCGTTACTATGTCAACACGACTACCAATGAGACCACCTGGGAACGTCCCAGCAGTTC
TCCTGGGATTTCAGCCAGCCCTGGCCCTCACAGGAGCTCTTTGCCTACAACAGTGAATGGATACCACGCA
TCAGGGACCCCGGCGCACCCTCCAGAGACTGCCCACATGAGTCTCCGAAAATCCACCGGTGATTCCCAGA
ACCTGGGATCCTCATCGCCAGGCAGGAAACAGAGCAAGGAAAACACCATCACCATCAACTGTGTGACATT
CCCTCACCCGGACACGATGCCTGAGCAACAGCTGCTCAAGCCCACCGAGTGGAGCTACTGTGACTACTTT
TGGGCGGACAAGAAGGACCCACAAGGCAATGGCACGGTGGCTGGCTTTGAACTGCTGCTGCAGAAGCAAC
TGAAAGGCAAGCAGATGCAGAAGGAGATGTCCGAGTTCATCCGGGAAAGGATAAAGATTGAAGAAGAATA
TGCAAAGAACCTGGCTAAGCTCTCTCAGAACTCCTTGGCTGCCCAGGAGGAAGGCTCCTTGGGAGAGGCA
TGGGCCCAAGTAAAGAAGAGCCTGGCAGATGAGGCTGAAGTTCATCTCAAGTTCTCTGCCAAGCTCCACA
GCGAGGTGGAGAAACCCCTGATGAACTTCAGAGAGAACTTCAAGAAAGACATGAAAAAGTGCGACCACCA
CATCGCTGACCTCCGTAAGCAGCTGGCAAGCCGCTATGCCTCAGTGGAGAAGGCCCGCAAAGCCCTCACA
GAGCGGCAGAAAGACCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGTTGAGCAACAAGACCGAGGAGG
ACATCAAGAAGGCACGGAGGAAGTCCACTCAGGCCGGAGATGACCTCATGCGCTGTGTGGACCTCTACAA
CCAGGCCCAGTCCAAGTGGTTTGAAGAGATGGTGACGACCACACTGGAACTGGAGCGGCTGGAGGTGGAG
AGGGTGGAAATGATCCGACAACATCTGTGCCAGTACACACAGCTGCGGCACGAGACGGACATGTTCAACC
AAAGCACAGTCGAGCCTGTGGACCAACTGCTGCGAAAAGTGGACCCAGCCAAAGACAGAGAGCTATGGGT
CAGAGAGCACAAAACAGGCAACATCCGCCCAGTGGACATGGAGATCTAG

Translation (412 aa):
MVPPPPGEESQTVILPPGWHSYLSPQGRRYYVNTTTNETTWERPSSSPGISASPGPHRSSLPTTVNGYHA
SGTPAHPPETAHMSLRKSTGDSQNLGSSSPGRKQSKENTITINCVTFPHPDTMPEQQLLKPTEWSYCDYF
WADKKDPQGNGTVAGFELLLQKQLKGKQMQKEMSEFIRERIKIEEEYAKNLAKLSQNSLAAQEEGSLGEA
WAQVKKSLADEAEVHLKFSAKLHSEVEKPLMNFRENFKKDMKKCDHHIADLRKQLASRYASVEKARKALT
ERQKDLEMKTQQLEIKLSNKTEEDIKKARRKSTQAGDDLMRCVDLYNQAQSKWFEEMVTTTLELERLEVE
RVEMIRQHLCQYTQLRHETDMFNQSTVEPVDQLLRKVDPAKDRELWVREHKTGNIRPVDMEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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