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Report for CCDS69668.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69668.1 Public Homo sapiens 9 ST6GALNAC6 24 110 108 CCDS HistoryNCBI Gene:30815Re-query CCDS DB by CCDS ID:69668.1Re-query CCDS DB by GeneID:30815See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69668.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373141.5 ENSP00000362234.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373141.5Link to Ensembl Protein Viewer:ENSP00000362234.1Re-query CCDS DB by Nucleotide ID:ENST00000373141Re-query CCDS DB by Protein ID:ENSP00000362234
Original member Current member EBI ENST00000373144.7 ENSP00000362237.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373144.7Link to Ensembl Protein Viewer:ENSP00000362237.3Re-query CCDS DB by Nucleotide ID:ENST00000373144Re-query CCDS DB by Protein ID:ENSP00000362237
Original member Current member EBI ENST00000622357.5 ENSP00000477575.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622357.5Link to Ensembl Protein Viewer:ENSP00000477575.1Re-query CCDS DB by Nucleotide ID:ENST00000622357Re-query CCDS DB by Protein ID:ENSP00000477575
Original member Current member EBI ENST00000643338.1 ENSP00000495890.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000643338.1Link to Ensembl Protein Viewer:ENSP00000495890.1Re-query CCDS DB by Nucleotide ID:ENST00000643338Re-query CCDS DB by Protein ID:ENSP00000495890
Original member Current member EBI ENST00000643029.1 ENSP00000496586.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000643029.1Link to Ensembl Protein Viewer:ENSP00000496586.1Re-query CCDS DB by Nucleotide ID:ENST00000643029Re-query CCDS DB by Protein ID:ENSP00000496586
Original member Current member NCBI NM_001287000.2 NP_001273929.1 Accepted alive Link to Nucleotide Sequence:NM_001287000.2Link to Protein Sequence:NP_001273929.1Re-query CCDS DB by Nucleotide ID:NM_001287000Re-query CCDS DB by Protein ID:NP_001273929Link to BLAST:NP_001273929.1
Original member Current member NCBI NM_001287001.2 NP_001273930.1 Accepted alive Link to Nucleotide Sequence:NM_001287001.2Link to Protein Sequence:NP_001273930.1Re-query CCDS DB by Nucleotide ID:NM_001287001Re-query CCDS DB by Protein ID:NP_001273930Link to BLAST:NP_001273930.1
Original member Current member NCBI NM_001287002.2 NP_001273931.1 Accepted alive Link to Nucleotide Sequence:NM_001287002.2Link to Protein Sequence:NP_001273931.1Re-query CCDS DB by Nucleotide ID:NM_001287002Re-query CCDS DB by Protein ID:NP_001273931Link to BLAST:NP_001273931.1
Original member Current member NCBI NM_001388489.1 NP_001375418.1 Accepted alive Link to Nucleotide Sequence:NM_001388489.1Link to Protein Sequence:NP_001375418.1Re-query CCDS DB by Nucleotide ID:NM_001388489Re-query CCDS DB by Protein ID:NP_001375418Link to BLAST:NP_001375418.1
Original member Current member NCBI NM_001400831.1 NP_001387760.1 Accepted alive Link to Nucleotide Sequence:NM_001400831.1Link to Protein Sequence:NP_001387760.1Re-query CCDS DB by Nucleotide ID:NM_001400831Re-query CCDS DB by Protein ID:NP_001387760Link to BLAST:NP_001387760.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273929.1 299 Q969X2-2 299 100% 0 0
NP_001273930.1 299 Q969X2-2 299 100% 0 0
NP_001273931.1 299 Q969X2-2 299 100% 0 0
NP_001375418.1 299 Q969X2-2 299 100% 0 0
NP_001387760.1 299 Q969X2-2 299 100% 0 0

Chromosomal Locations for CCDS 69668.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 127886599 127886788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127887484 127887591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127890637 127891043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127894512 127894691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127896242 127896256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (900 nt):
ATGAGTAGCAACAAAGAGCAGCGGTCAGCAGTGTTCGTGATCCTCTTTGCCCTCATCACCATCCTCATCC
TCTACAGCTCCAACAGTGCCAATGAGGTCTTCCATTACGGCTCCCTGCGGGGCCGTAGCCGCCGACCTGT
CAACCTCAAGAAGTGGAGCATCACTGACGGCTATGTCCCCATTCTCGGCAACAAGACACTGCCCTCTCGG
TGCCACCAGTGTGTGATTGTCAGCAGCTCCAGCCACCTGCTGGGCACCAAGCTGGGCCCTGAGATCGAGC
GGGCTGAGTGTACAATCCGCATGAATGATGCACCCACCACTGGCTACTCAGCTGATGTGGGCAACAAGAC
CACCTACCGCGTCGTGGCCCATTCCAGTGTGTTCCGCGTGCTGAGGAGGCCCCAGGAGTTTGTCAACCGG
ACCCCTGAAACCGTGTTCATCTTCTGGGGGCCCCCGAGCAAGATGCAGAAGCCCCAGGGCAGCCTCGTGC
GTGTGATCCAGCGAGCGGGCCTGGTGTTCCCCAACATGGAAGCATATGCCGTCTCTCCCGGCCGCATGCG
GCAATTTGACGACCTCTTCCGGGGTGAGACGGGCAAGGACAGGGAGAAGTCTCATTCGTGGTTGAGCACA
GGCTGGTTTACCATGGTGATCGCGGTGGAGTTGTGTGACCACGTGCATGTCTATGGCATGGTCCCCCCCA
ACTACTGCAGCCAGCGGCCCCGCCTCCAGCGCATGCCCTACCACTACTACGAGCCCAAGGGGCCGGACGA
ATGTGTCACCTACATCCAGAATGAGCACAGTCGCAAGGGCAACCACCACCGCTTCATCACCGAGAAAAGG
GTCTTCTCATCGTGGGCCCAGCTGTATGGCATCACCTTCTCCCACCCCTCCTGGACCTAG

Translation (299 aa):
MSSNKEQRSAVFVILFALITILILYSSNSANEVFHYGSLRGRSRRPVNLKKWSITDGYVPILGNKTLPSR
CHQCVIVSSSSHLLGTKLGPEIERAECTIRMNDAPTTGYSADVGNKTTYRVVAHSSVFRVLRRPQEFVNR
TPETVFIFWGPPSKMQKPQGSLVRVIQRAGLVFPNMEAYAVSPGRMRQFDDLFRGETGKDREKSHSWLST
GWFTMVIAVELCDHVHVYGMVPPNYCSQRPRLQRMPYHYYEPKGPDECVTYIQNEHSRKGNHHRFITEKR
VFSSWAQLYGITFSHPSWT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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