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Report for CCDS69490.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69490.1 Public Homo sapiens 8 ARMC1 24 110 108 CCDS HistoryNCBI Gene:55156Re-query CCDS DB by CCDS ID:69490.1Re-query CCDS DB by GeneID:55156See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 69490.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000458464.3 ENSP00000388572.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000458464.3Link to Ensembl Protein Viewer:ENSP00000388572.2Re-query CCDS DB by Nucleotide ID:ENST00000458464Re-query CCDS DB by Protein ID:ENSP00000388572
Original member Current member NCBI NM_001286702.2 NP_001273631.1 Accepted alive Link to Nucleotide Sequence:NM_001286702.2Link to Protein Sequence:NP_001273631.1Re-query CCDS DB by Nucleotide ID:NM_001286702Re-query CCDS DB by Protein ID:NP_001273631Link to BLAST:NP_001273631.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273631.1 180 Q9NVT9-2 180 100% 0 0

Chromosomal Locations for CCDS 69490.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 65604394 65604585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 65605263 65605337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 65605422 65605538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 65622263 65622354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 65627216 65627282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (543 nt):
ATGTCTGCCTGGCCTTATTTTATTTATGGACCATCCCAACCCTCCAGTCGTCCACTCCGCTTTGCTTGCT
CTTCGATACTTGGCAGAATGCCGTGCAAACAGAGAAAAGATGAAAGGAGAACTGGGTATGATGTTGAGCT
TACAAAATGTTATACAGAATCTCGGAGAAATCTATGTGAAGAGGCTTTGTTAAAAATTAAAGGTGTTATT
AGCTTTACTTTTCAAATGGCTGTTCAAAGGTGTGTGGTGCGAATCCGTTCAGATTTGAAAGCTGAGGCTT
TGGCATCAGCAATAGCATCAACCAAGGTTATGAAAGCTCAGCAAGTTGTGAAAAGTGAAAGTGGAGAAGA
GATGTTGGTCCCATTCCAAGATACTCCTGTGGAAGTTGAACAGAACACAGAGCTACCTGACTACCTGCCT
GAGGATGAGAGTCCCACAAAGGAACAGGACAAAGCGGTGTCCCGGGTCGGCTCACACCCAGAAGGTGGAG
CTAGCTGGCTTAGCACAGCTGCAAACTTTTTATCCAGATCATTTTATTGGTGA

Translation (180 aa):
MSAWPYFIYGPSQPSSRPLRFACSSILGRMPCKQRKDERRTGYDVELTKCYTESRRNLCEEALLKIKGVI
SFTFQMAVQRCVVRIRSDLKAEALASAIASTKVMKAQQVVKSESGEEMLVPFQDTPVEVEQNTELPDYLP
EDESPTKEQDKAVSRVGSHPEGGASWLSTAANFLSRSFYW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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