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Report for CCDS6778.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6778.1 Public Homo sapiens 9 OR2K2 24 110 108 CCDS HistoryNCBI Gene:26248Re-query CCDS DB by CCDS ID:6778.1Re-query CCDS DB by GeneID:26248See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6778.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302681.3 ENSP00000305055.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302681.3Link to Ensembl Protein Viewer:ENSP00000305055.1Re-query CCDS DB by Nucleotide ID:ENST00000302681Re-query CCDS DB by Protein ID:ENSP00000305055
Original member Current member NCBI NM_205859.2 NP_995581.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_205859.2Link to Protein Sequence:NP_995581.1Re-query CCDS DB by Nucleotide ID:NM_205859Re-query CCDS DB by Protein ID:NP_995581Link to BLAST:NP_995581.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_995581.1 316 Q8NGT1 316 100% 0 0

Chromosomal Locations for CCDS 6778.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 111327483 111328433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGCAAGGAGAAAACTTCACCATTTGGAGCATTTTTTTCTTGGAGGGATTTTCCCAGTACCCAGGGTTAG
AA
GTGGTTCTCTTCGTCTTCAGCCTTGTAATGTATCTGACAACGCTCTTGGGCAACAGCACTCTTATTTT
G
ATCACTATCCTAGATTCACGCCTTAAAACCCCCATGTACTTATTCCTTGGAAATCTCTCTTTCATGGAT
ATT
TGTTACACATCTGCCTCTGTTCCTACTTTGCTGGTGAACTTGCTGTCATCCCAGAAAACCATTATCT
TT
TCTGGGTGTGCTGTACAGATGTATCTGTCCCTTGCCATGGGCTCCACAGAGTGTGTGCTCCTGGCCGT
G
ATGGCATATGACCGTTATGTGGCCATTTGTAACCCGCTGAGATACTCCATCATCATGAACAGGTGCGTC
TGT
GCACGGATGGCTACGGTCTCCTGGGTGACGGGTTGCCTGACCGCTCTGCTGGAAACCAGTTTTGCCC
TG
CAGATACCCCTCTGTGGGAATCTCATCGATCACTTCACGTGTGAAATTCTGGCGGTGCTAAAGTTAGC
T
TGCACAAGTTCACTGCTCATGAACACCATCATGCTGGTGGTCAGCATTCTCCTCTTGCCAATTCCAATG
CTC
TTAGTTTGCATCTCTTACATCTTCATCCTTTCCACTATTCTGAGAATCACCTCAGCAGAGGGAAGAA
AC
AAGGCTTTTTCTACCTGTGGTGCCCATTTGACTGTGGTGATTTTGTATTATGGGGCTGCCCTCTCTAT
G
TACCTAAAGCCTTCTTCATCAAATGCACAAAAAATAGACAAAATCATCTCGTTGCTTTACGGAGTGCTT
ACC
CCTATGTTGAACCCCATAATTTACAGTTTAAGAAACAAGGAAGTCAAAGATGCTATGAAGAAATTGC
TG
GGCAAAATAACATTGCATCAAACACACGAACATCTCTGA


Translation (316 aa):
MQGENFTIWSIFFLEGFSQYPGLEVVLFVFSLVMYLTTLLGNSTLILITILDSRLKTPMYLFLGNLSFMD
I
CYTSASVPTLLVNLLSSQKTIIFSGCAVQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYSIIMNRCV
C
ARMATVSWVTGCLTALLETSFALQIPLCGNLIDHFTCEILAVLKLACTSSLLMNTIMLVVSILLLPIPM
L
LVCISYIFILSTILRITSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSNAQKIDKIISLLYGVL
T
PMLNPIIYSLRNKEVKDAMKKLLGKITLHQTHEHL




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser