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Report for CCDS6764.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6764.1 Public Homo sapiens 9 FSD1L 24 110 108 CCDS HistoryNCBI Gene:83856Re-query CCDS DB by CCDS ID:6764.1Re-query CCDS DB by GeneID:83856See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6764.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000469022.5 ENSP00000487223.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000469022.5Link to Ensembl Protein Viewer:ENSP00000487223.1Re-query CCDS DB by Nucleotide ID:ENST00000469022Re-query CCDS DB by Protein ID:ENSP00000487223
Original member Current member NCBI NM_031919.5 NP_114125.1 Accepted alive Link to Nucleotide Sequence:NM_031919.5Link to Protein Sequence:NP_114125.1Re-query CCDS DB by Nucleotide ID:NM_031919Re-query CCDS DB by Protein ID:NP_114125Link to BLAST:NP_114125.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114125.1 145 Q9BXM9-3 145 100% 0 0

Chromosomal Locations for CCDS 6764.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 105448221 105448235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105464236 105464331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105468193 105468324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105471904 105472098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (438 nt):
ATGGACTCCCAGAAAGAAGCTCTACAGAGGATCATTTCAACTCTGGCAAATAAAAATGATGAAATTCAGA
ACTTTATTGATACACTACATCATACACTAAAAGGAGTTCAGGAAAATTCGTCCAACATACTCTCAGAGTT
AGATGAAGAATTTGATAGTTTATACTCTATACTGGATGAAGTAAAAGAAAGTATGATTAACTGTATCAAG
CAGGAACAAGCTCGTAAATCCCAAGAGTTACAGAGTCAGATTAGTCAATGTAATAATGCCCTGGAGAACT
CTGAAGAACTATTAGAATTTGCAACAAGGTCATTAGATATAAAGGAACCTGAAGAATTTTCAAAGGTACA
CAAAAACTGCATTAATACACTTAACAAGGGAAGTTGTATTTTTAAAAAGGCGTTTTTGTTTTTCTTTAGT
TTTGGATTTCTTTACTGA

Translation (145 aa):
MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKESMINCIK
QEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKNCINTLNKGSCIFKKAFLFFFS
FGFLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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