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Report for CCDS66773.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66773.1 Public Homo sapiens 15 ATOSA 24 110 108 CCDS HistoryNCBI Gene:56204Re-query CCDS DB by CCDS ID:66773.1Re-query CCDS DB by GeneID:56204See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66773.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000546305.6 ENSP00000443598.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000546305.6Link to Ensembl Protein Viewer:ENSP00000443598.2Re-query CCDS DB by Nucleotide ID:ENST00000546305Re-query CCDS DB by Protein ID:ENSP00000443598
Original member Current member NCBI NM_001286495.2 NP_001273424.1 Accepted alive Link to Nucleotide Sequence:NM_001286495.2Link to Protein Sequence:NP_001273424.1Re-query CCDS DB by Nucleotide ID:NM_001286495Re-query CCDS DB by Protein ID:NP_001273424Link to BLAST:NP_001273424.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273424.1 1083 Q32MH5-3 1083 100% 0 0

Chromosomal Locations for CCDS 66773.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 52582154 52582307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52584745 52584944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52587151 52587219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52593578 52593736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52600127 52600235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52601086 52601165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52605133 52605246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52608568 52610383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52611130 52611255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52611575 52611777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52613673 52613857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52651870 52651906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3252 nt):
ATGGTTTTCAGTGGAAACAAAGGGCTTCACAGAGAAGATACTCTGGATGAATATTTTGAATATGATGCAG
AGGAGTTCTTGGTCTCTTTGGCCTTGCTGATAACAGAAGGACGAACACCTGAATGTTCTGTAAAAGGTCG
AACAGAAAGCTTTCATTGCCCTCCAGCACAGTCTTGTTACCCAGTAACTACCAAACATGAATGTAGTGAC
AAGCTGGCCCAGTGCCGCCAAGCCAGACGAACTAGGTCTGAGGTCACATTGTTGTGGAAGAATAACCTTC
CAATCATGGTGGAAATGATGCTACTACCAGACTGCTGCTACAGCGATGATGGGCCCACCACAGAGGGAAT
TGATCTAAATGATCCTGCGATTAAGCAAGATGCATTATTATTAGAAAGATGGATCTTGGAGCCAGTTCCT
CGACAGAATGGTGACCGATTTATTGAAGAGAAGACGCTTCTGTTGGCTGTCCGCTCATTTGTGTTTTTTT
CTCAGTTAAGTGCATGGCTGAGTGTTTCTCATGGTGCTATTCCACGAAATATTCTCTACAGAATCAGTGC
TGCTGATGTAGACCTACAGTGGAATTTTTCACAGACTCCAATTGAGCATGTGTTTCCTGTTCCCAATGTT
TCTCACAATGTTGCCTTGAAAGTCAGTGTTCAGTCCTTGCCCAGACAATCTAATTATCCAGTTTTGACGT
GCAGTATTCACACTAATATTGGCCTTTATGAGAAAAGAATTCAACAACATAAACTTAAAACTCATCAGCA
CCATAACCCAAATGAAGCAGAACAATGTGGTACAAACAGTTCACAGCGTCTGTGTAGCAAACAAACTTGG
ACCATGGCACCTGAAAGTGTGTTACATGCAAAAAGTGGCCCAAGTCCAGAATATACTGCAGCTGTCAAAA
ATATCAAACTATATCCAGGCACTGGCAGTAAATCTGACCATGGGACATCTCAAGCCAATATTCTAGGCTT
TAGTGGTATAGGTGATATAAAATCACAAGAAACATCAGTGAGAACTTTAAAATCATTTTCAATGGTTGAT
TCCAGTATCTCTAACCGCCAGAGTTTCTGGCAGTCAGCTGGTGAGACTAACCCTTTAATAGGCTCTTTAA
TTCAGGAGCGGCAAGAAATCATTGCAAGAATTGCCCAACATTTGATTCATTGTGATCCAAGCACTTCACA
TGTTTCTGGACGTCCATTTAATACTCAAGAGTCTAGTTCACTCCATTCAAAACTTTTCCGGGTTTCACAA
GAAAATGAGAACGTGGGAAAAGGTAAAGAAGCTTTCTCCATGACTTTTGGTAGTCCAGAGTTTAGTTCCC
CAGAAGACACCAATGAGGGGAAAATTCGACTAAAACCAGAAACTCCTCGAAGTGAAACTTGTATTTCTAA
TGACTTTTATTCTCATATGCCTGTTGGAGAGACTAATCCTTTGATAGGCTCTTTACTCCAGGAGCGGCAA
GATGTTATTGCAAGGATTGCTCAACACTTGGAGCACATTGATCCAACAGCATCACATATCCCCCGGCAGT
CATTCAACATGCATGACTCCAGTTCGGTTGCATCTAAAGTGTTTAGGAGTTCATATGAAGACAAAAATTT
GTTGAAGAAAAATAAGGATGAGTCCTCAGTTTCCATTTCTCACACAAAATGTTCCTTGTTAGGAGACATC
AGTGATGGGAAAAACTTAGTACCTAATAAATGTTTTACTTCTTTTAAAAATAATAGTAAAGAAAAGTGTT
CTTTGAAACATCAAACAAGAAATCAGTGTCAGAACAATCCTAGTGAAATCATCCAAAGTACGTATCAGGA
GACACAGAACAAAAGTTCTAGTTTATCAACTTCCTCAATTTTGTCTCAGCACAAAGAAAATAACTTAGAT
TTGACAAGCAGATTCAAGGAGCAAGAAATGAGCAATGGAATTGATAAACAGTATTCAAATTGCACCACTA
TTGACAAACAGATTTGTACAAATAAGTATAAGGAAAAAATAATAAATGAGAACTATAATCCAAAATTCTT
TGGCAATCTTCAGTCTGATGATTCCAAAAAAAATGACTCAAAAATAAAAGTTACTGTGTTGGAAATGTCT
GAATATTTGAACAAATATGAAAGCATGTCCTCAAATAAAGACTCAAAAAGGCCTAAGACATGTGAGCAAA
ATACTCAACTTAATAGCATAGAGAATTATCTCAATAAAGATAATGAAGGTTTCAAATGTAAAAAGTCAGA
CCAATTAAAAAATGAACAAGATAAGCAAGAAGATCCAACTAATGAAAAATCCCAAAACTATTCTCAGAGA
AGAAGTATAAAAGACTGTTTGTCTACATGTGAGCAACCAAAAAATACAGAGGTATTGAGGACTACACTGA
AACATTCAAATGTGTGGCGAAAACATAATTTTCATTCCTTGGATGGAACTTCAACCAGAGCCTTTCATCC
TCAAACTGGATTGCCTCTTCTTTCAAGCCCTGTTCCTCAAAGAAAAACACAATCAGGTTGCTTTGATCTG
GATTCTTCATTACTACATCTGAAAAGCTTCTCATCTAGAAGTCCTCGACCATGTTTAAACATTGAAGATG
ATCCAGATATTCATGAAAAACCATTTTTGAGTTCTAGTGCTCCACCTATAACAAGTCTTAGTCTCCTAGG
AAATTTTGAGGAATCTGTCTTGAACTATCGTTTCGATCCTCTCGGCATTGTTGATGGTTTTACTGCCGAG
GTAGGGGCAAGTGGTGCTTTCTGCCCCACACATTTGACTCTTCCAGTTGAAGTGTCATTCTACAGTGTTT
CAGATGACAATGCTCCCTCTCCTTATATGGGTGTGATTACTTTAGAGTCCCTTGGTAAAAGGGGTTATCG
AGTACCTCCTTCAGGAACAATACAAGTGACCTTATTTAATCCTAATAAGACTGTGGTGAAGATGTTTGTT
GTGATATATGATTTACGAGATATGCCAGCCAATCATCAGACATTCCTACGACAAAGAACTTTTTCTGTAC
CTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATTACG
CTACCTCATACATCTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGACGTACGGCTC
CTGTTCTCTAGAAAGTCAATGGAGGTTGATAGCGGTGCTGCATATGAACTCAAATCTTACACTGAATCAC
CAACAAACCCTCAGTTTTCACCAAGATGTTGA

Translation (1083 aa):
MVFSGNKGLHREDTLDEYFEYDAEEFLVSLALLITEGRTPECSVKGRTESFHCPPAQSCYPVTTKHECSD
KLAQCRQARRTRSEVTLLWKNNLPIMVEMMLLPDCCYSDDGPTTEGIDLNDPAIKQDALLLERWILEPVP
RQNGDRFIEEKTLLLAVRSFVFFSQLSAWLSVSHGAIPRNILYRISAADVDLQWNFSQTPIEHVFPVPNV
SHNVALKVSVQSLPRQSNYPVLTCSIHTNIGLYEKRIQQHKLKTHQHHNPNEAEQCGTNSSQRLCSKQTW
TMAPESVLHAKSGPSPEYTAAVKNIKLYPGTGSKSDHGTSQANILGFSGIGDIKSQETSVRTLKSFSMVD
SSISNRQSFWQSAGETNPLIGSLIQERQEIIARIAQHLIHCDPSTSHVSGRPFNTQESSSLHSKLFRVSQ
ENENVGKGKEAFSMTFGSPEFSSPEDTNEGKIRLKPETPRSETCISNDFYSHMPVGETNPLIGSLLQERQ
DVIARIAQHLEHIDPTASHIPRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDI
SDGKNLVPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLD
LTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFFGNLQSDDSKKNDSKIKVTVLEMS
EYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQR
RSIKDCLSTCEQPKNTEVLRTTLKHSNVWRKHNFHSLDGTSTRAFHPQTGLPLLSSPVPQRKTQSGCFDL
DSSLLHLKSFSSRSPRPCLNIEDDPDIHEKPFLSSSAPPITSLSLLGNFEESVLNYRFDPLGIVDGFTAE
VGASGAFCPTHLTLPVEVSFYSVSDDNAPSPYMGVITLESLGKRGYRVPPSGTIQVTLFNPNKTVVKMFV
VIYDLRDMPANHQTFLRQRTFSVPVKQEVKRSVNKENIRHTEERLLRYLIHLRFQSSKSGKIYLHRDVRL
LFSRKSMEVDSGAAYELKSYTESPTNPQFSPRC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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