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Report for CCDS66580.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66580.1 Public Homo sapiens 13 ANKRD10 24 110 108 CCDS HistoryNCBI Gene:55608Re-query CCDS DB by CCDS ID:66580.1Re-query CCDS DB by GeneID:55608See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66580.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310847.8 ENSP00000312534.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000310847.8Link to Ensembl Protein Viewer:ENSP00000312534.4Re-query CCDS DB by Nucleotide ID:ENST00000310847Re-query CCDS DB by Protein ID:ENSP00000312534
Original member Current member NCBI NM_001286721.3 NP_001273650.1 Accepted alive Link to Nucleotide Sequence:NM_001286721.3Link to Protein Sequence:NP_001273650.1Re-query CCDS DB by Nucleotide ID:NM_001286721Re-query CCDS DB by Protein ID:NP_001273650Link to BLAST:NP_001273650.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273650.1 220 Q9NXR5-2 220 100% 0 0

Chromosomal Locations for CCDS 66580.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 110893150 110893263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110894109 110894202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110906033 110906124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110910618 110910770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110914725 110914934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (663 nt):
ATGTCGGCGGCGGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTT
TCCCGCTGCACCGCGCCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCA
CGCCCACCTGGCCTCTGAGGACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAG
TTGGAGTGCTTAGTGCAGTTGGTGAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGA
CGCCAGCCCACATTGCAGCCTTTGGGGGACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAA
CATTAACAAACCGGATTGTGAGGGTGAAACTCCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGC
ATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGAGTTTATTTCACAGAGCAGTGTACATTCTTGTCTTC
CAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAGTTTTAATTCAGTGTCTAAAGCCTGAGAAATG
CCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAA
CCTCCAGAATTGTCATCTGAACCATTTCTATAA

Translation (220 aa):
MSAAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLATLCSLLQQTPHAHLASEDSFYGWTPVHWAAHFGK
LECLVQLVRAGATLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLEC
ISALVANGAHVEFISQSSVHSCLPGELQHGVTFDPSVLIQCLKPEKCQWPDSSRHCTNPGFPRVCPVSLE
PPELSSEPFL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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