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Report for CCDS66165.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66165.1 Public Homo sapiens 11 FAM168A 24 110 108 CCDS HistoryNCBI Gene:23201Re-query CCDS DB by CCDS ID:66165.1Re-query CCDS DB by GeneID:23201See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66165.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000450446.6 ENSP00000390501.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000450446.6Link to Ensembl Protein Viewer:ENSP00000390501.2Re-query CCDS DB by Nucleotide ID:ENST00000450446Re-query CCDS DB by Protein ID:ENSP00000390501
Original member Current member NCBI NM_001286051.2 NP_001272980.1 Accepted alive Link to Nucleotide Sequence:NM_001286051.2Link to Protein Sequence:NP_001272980.1Re-query CCDS DB by Nucleotide ID:NM_001286051Re-query CCDS DB by Protein ID:NP_001272980Link to BLAST:NP_001272980.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001272980.1 129 Q92567-3 129 100% 0 0

Chromosomal Locations for CCDS 66165.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 73407531 73407643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73419874 73419999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73430690 73430770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73468405 73468474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (390 nt):
ATGAACCCTGTTTACAGCCCCGTGCAGCCTGGGGCTCCTTATGGCAACCCTAAGAACATGGCCTACACGG
GTTACCCCACAGCCTATCCAGCAGCTGCCCCTGCCTACAATCCCAGCCTGTACCCCACCAATAGTCCCAG
TTATGCTCCAGCAACTCTGCTGATGAAACAGGCCTGGCCACAGAACTCGTCTTCCTGTGGCACTGAAGGC
ACCTTCCACCTCCCAGTGGACACCGGGACCGAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTCAGTA
CCCTGCTGACTACACCCCAGCACACGGCGATTGGGGCACACCCTGTCTCCATGCCAACATATAGGGCCCA
AGGAACCCCTGCGTACAGCTACGTGCCCCCACACTGGTAA

Translation (129 aa):
MNPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEG
TFHLPVDTGTENRTYQASSAAFSTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSYVPPHW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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