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Report for CCDS65109.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
65109.1 Public Homo sapiens 9 ZFP37 24 110 108 CCDS HistoryNCBI Gene:7539Re-query CCDS DB by CCDS ID:65109.1Re-query CCDS DB by GeneID:7539See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 65109.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000555206.5 ENSP00000451310.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000555206.5Link to Ensembl Protein Viewer:ENSP00000451310.1Re-query CCDS DB by Nucleotide ID:ENST00000555206Re-query CCDS DB by Protein ID:ENSP00000451310
Original member Current member NCBI NM_001282518.2 NP_001269447.1 Accepted alive Link to Nucleotide Sequence:NM_001282518.2Link to Protein Sequence:NP_001269447.1Re-query CCDS DB by Nucleotide ID:NM_001282518Re-query CCDS DB by Protein ID:NP_001269447Link to BLAST:NP_001269447.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269447.1 631 Q9Y6Q3-3 631 100% 0 0

Chromosomal Locations for CCDS 65109.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 113042725 113044268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113049362 113049496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113049791 113049875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113056557 113056688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1896 nt):
ATGTCGGTCTCCAGCGGCGTCCAGATTCTGACAAAGCCAGAGACCGTGGACCGGAGGAGAAGTGCGGAAA
CGACCAAAGAGGCCGGGCGACCACTGGAGATGGCTGTGTCCGAGCCCGAGGCCAGCGCCGCGAAGGAATG
GAAGCAACTGGATCCTGCTCAGAGCAACCTGTATAATGATGTGATGCTGGAGAACTACTGCAACCAAGCC
TCAATGGGGTGTCAAGCTCCCAAACCAGACATGATCTCCAAGTTGGAAAAAGGAGAAGCACCATGGTTGG
GGAAGGGGAAAAGACCCAGTCAAGGTTGTCCAAGTAAAATAGCAAGACCCAAGCAAAAAGAAACTGATGG
AAAAGTCCAGAAAGATGATGACCAGCTTGAAAATATCCAGAAATCTCAAAACAAACTCCTCAGGGAAGTT
GCAGTCAAGAAGAAAACTCAAGCTAAGAAGAATGGCAGTGACTGTGGTTCACTGGGGAAAAAAAATAATT
TGCATAAAAAACATGTTCCTTCAAAGAAAAGGCTTCTTAAATTTGAGTCATGTGGAAAAATTTTGAAACA
GAATTTAGATTTACCTGATCACTCAAGAAACTGTGTAAAAAGGAAATCTGATGCAGCTAAAGAACACAAG
AAGTCATTCAACCATAGCTTATCTGATACAAGGAAAGGCAAAAAGCAAACTGGAAAGAAACATGAGAAAT
TATCCAGCCATAGCTCATCTGATAAGTGTAACAAAACTGGCAAAAAACATGACAAATTATGCTGTCATAG
TTCATCCCATATTAAACAGGACAAAATTCAAACTGGAGAGAAACATGAGAAATCACCCAGCCTTAGCTCA
TCTACTAAGCATGAAAAACCTCAAGCTTGTGTGAAACCCTATGAATGTAATCAATGTGGAAAGGTTCTCA
GCCATAAACAAGGACTCATTGACCATCAGAGAGTTCATACTGGGGAGAAACCATATGAATGTAATGAATG
TGGGATAGCCTTTAGCCAAAAGTCACACCTTGTTGTACATCAGAGAACTCACACCGGAGAAAAACCATAT
GAATGTATTCAGTGTGGCAAAGCCCATGGTCATAAACATGCACTCACTGACCATCTAAGAATTCATACTG
GAGAAAAGCCCTATGAATGTGCTGAATGTGGGAAAACCTTCAGACACAGCTCAAACCTTATTCAACATGT
GAGATCTCACACAGGTGAGAAGCCATATGAATGTAAGGAATGTGGGAAGTCTTTTAGGTATAACTCATCT
CTTACCGAACATGTGAGAACACATACAGGTGAAATACCATATGAATGCAATGAATGTGGAAAAGCCTTTA
AGTATAGCTCATCCCTTACTAAACACATGAGAATTCATACAGGTGAGAAACCCTTTGAATGTAATGAATG
TGGGAAAGCTTTCAGCAAGAAGTCACACCTCATTATACATCAAAGAACTCATACTAAGGAGAAACCTTAT
AAATGTAATGAGTGTGGAAAAGCCTTTGGACATAGCTCATCTCTTACTTACCATATGAGAACTCATACAG
GTGAAAGTCCCTTTGAATGTAATCAATGTGGGAAAGGCTTTAAACAAATTGAAGGCCTTACTCAACATCA
GAGAGTTCATACTGGAGAGAAACCGTATGAGTGTAATGAATGTGGGAAAGCCTTTAGCCAAAAGTCTCAC
CTCATTGTACATCAGAGAACTCATACTGGGGAGAAACCTTATGAATGTAACGAATGTGAAAAAGCCTTTA
ATGCAAAATCACAGCTTGTTATACATCAGCGATCCCACACTGGAGAAAAACCCTATGAATGTAATGAATG
TGGGAAAACTTTCAAACAAAATGCATCCCTAACCAAACATGTGAAAACTCATTCAGAAGATAAATCTCAT
GAGTGA

Translation (631 aa):
MSVSSGVQILTKPETVDRRRSAETTKEAGRPLEMAVSEPEASAAKEWKQLDPAQSNLYNDVMLENYCNQA
SMGCQAPKPDMISKLEKGEAPWLGKGKRPSQGCPSKIARPKQKETDGKVQKDDDQLENIQKSQNKLLREV
AVKKKTQAKKNGSDCGSLGKKNNLHKKHVPSKKRLLKFESCGKILKQNLDLPDHSRNCVKRKSDAAKEHK
KSFNHSLSDTRKGKKQTGKKHEKLSSHSSSDKCNKTGKKHDKLCCHSSSHIKQDKIQTGEKHEKSPSLSS
STKHEKPQACVKPYECNQCGKVLSHKQGLIDHQRVHTGEKPYECNECGIAFSQKSHLVVHQRTHTGEKPY
ECIQCGKAHGHKHALTDHLRIHTGEKPYECAECGKTFRHSSNLIQHVRSHTGEKPYECKECGKSFRYNSS
LTEHVRTHTGEIPYECNECGKAFKYSSSLTKHMRIHTGEKPFECNECGKAFSKKSHLIIHQRTHTKEKPY
KCNECGKAFGHSSSLTYHMRTHTGESPFECNQCGKGFKQIEGLTQHQRVHTGEKPYECNECGKAFSQKSH
LIVHQRTHTGEKPYECNECEKAFNAKSQLVIHQRSHTGEKPYECNECGKTFKQNASLTKHVKTHSEDKSH
E


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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