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Report for CCDS6473.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6473.1 Public Homo sapiens 9 LURAP1L 24 110 108 CCDS HistoryNCBI Gene:286343Re-query CCDS DB by CCDS ID:6473.1Re-query CCDS DB by GeneID:286343See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6473.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319264.4 ENSP00000321026.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319264.4Link to Ensembl Protein Viewer:ENSP00000321026.3Re-query CCDS DB by Nucleotide ID:ENST00000319264Re-query CCDS DB by Protein ID:ENSP00000321026
Original member Current member NCBI NM_203403.2 NP_981948.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_203403.2Link to Protein Sequence:NP_981948.1Re-query CCDS DB by Nucleotide ID:NM_203403Re-query CCDS DB by Protein ID:NP_981948Link to BLAST:NP_981948.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_981948.1 228 Q8IV03 228 100% 0 0

Chromosomal Locations for CCDS 6473.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 12775716 12776027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 12821386 12821760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (687 nt):
ATGGAAGACAGCCCGCTGCCAGACCTCAGAGACATCGAGCTGAAGCTGGGGCGCAAAGTACCCGAGAGTC
TAGTGCGCTCTCTCCGTGGGGAGGAGCCGGTTCCCAGGGAAAGGGACAGGGACCCCTGCGGGGGGAGCGG
TGGTGGTGGCGGCGGCGGCGGCGGCTGCAGTAGCAGCAGCAGCTACTGCAGCTTCCCTCCCTCCTTGTCG
TCCTCCTCTTCGTCCTCCCCAACCTCTGGCTCCCCACGAGGTAGCCACTCTAGCGCCCTGGAGAGGCTAG
AAACCAAGCTTCACCTCCTCAGGCAAGAGATGGTTAACCTCAGAGCCACAGACGTCAGGCTCATGCGCCA
GTTGCTTGTAATCAATGAGAGCATCGAGTCCATCAAGTGGATGATCGAAGAAAAAGCCACCATTACCAGC
AGAGGCAGCAGCCTCAGTGGCAGCCTGTGCAGTTTGTTGGAGAGTCAGAGCACCTCCTTACGTGGCAGCT
ACAACAGCCTACACGATGGCAGTGATGGGCTGGATGGCATTTCCGTGGGAAGTTATCTGGACACGTTGGC
GGATGATGTCCCAGGCCATCAGACCCCTTCAGACTTGGACCAATTCAGTGACAGCTCCCTCATAGAGGAC
TCACAGGCACTACACAAGCGTCCTAAATTGGATTCTGAATACTACTGCTTTGGCTAG

Translation (228 aa):
MEDSPLPDLRDIELKLGRKVPESLVRSLRGEEPVPRERDRDPCGGSGGGGGGGGGCSSSSSYCSFPPSLS
SSSSSSPTSGSPRGSHSSALERLETKLHLLRQEMVNLRATDVRLMRQLLVINESIESIKWMIEEKATITS
RGSSLSGSLCSLLESQSTSLRGSYNSLHDGSDGLDGISVGSYLDTLADDVPGHQTPSDLDQFSDSSLIED
SQALHKRPKLDSEYYCFG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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