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Report for CCDS63504.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63504.1 Public Homo sapiens 22 PHF21B 24 110 108 CCDS HistoryNCBI Gene:112885Re-query CCDS DB by CCDS ID:63504.1Re-query CCDS DB by GeneID:112885See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63504.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000403565.5 ENSP00000385053.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000403565.5Link to Ensembl Protein Viewer:ENSP00000385053.1Re-query CCDS DB by Nucleotide ID:ENST00000403565Re-query CCDS DB by Protein ID:ENSP00000385053
Original member Current member NCBI NM_001284296.2 NP_001271225.1 Accepted alive Link to Nucleotide Sequence:NM_001284296.2Link to Protein Sequence:NP_001271225.1Re-query CCDS DB by Nucleotide ID:NM_001284296Re-query CCDS DB by Protein ID:NP_001271225Link to BLAST:NP_001271225.1

Chromosomal Locations for CCDS 63504.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 44883086 44883304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44885426 44885529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44885863 44885938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44887963 44888121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44889760 44889782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44891306 44891360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44893457 44893533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44896032 44896083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44913822 44913962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44916280 44916357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (984 nt):
ATGGCCCCCAGCACCGCCGTGTCTGTGGTCAGTGACAGCATCAAAGTCCAGCCCCTCCTCATCAGTGCTG
ACAACAAGGTCATCATCATTCAGCCTCAAGTGCAGACGCAGCCCGAGAGCACGGCAGAGTCGCGGCCGCC
CACAGAGGAGCCATCTCAGGGAGCTCAGGCCACCAAAAAGAAGAAGGAAGACCGGCCCCCGACCCAGGAG
AACCCCGAGAAAATCGCCTTCATGGTAGCGCTAGGCCTGGTTACCACGGAACATTTGGAAGAAATCCAGA
GCAAGCGACAGGAGCGGAAGAGAAGAAGCACAGCCAACCCTGCCTACAGCGGCCTCCTGGAGACCGAGAG
GAAACGGCTGGCCTCCAACTATCTCAACAACCCCCTGTTCCTCACAGCGAGAGCCAATGAGGACCCCTGC
TGGAAGAACGAGATCACCCACGATGAGCACTGTGCCGCCTGCAAGCGAGGGGCCAACCTGCAGCCCTGCG
GCACCTGCCCGGGGGCCTACCACCTCAGCTGCCTGGAGCCGCCCCTCAAGACGGCGCCCAAGGGCGTGTG
GGTGTGCCCCAGGTGCCAGCAGAAGGCCTTAAAGAAAGACGAGGGTGTGCCCTGGACTGGGATGCTGGCC
ATCGTGCACTCTTATGTCACCCACAAGACAGTCAAAGAAGAGGAGAAGCAGAAGCTGCTGCAACGAGGCA
GTGAGCTGCAGAACGAGCACCAGCAGCTGGAGGAGCGGGACCGGCGGCTGGCGTCAGCAGTGCAGAAATG
CCTGGAGTTGAAGACAAGCCTGCTGGCCCGCCAGAGGGGCACCCAGTCATCCCTGGACCGCCTGCGGGCC
CTCCTGAGACTGATACAGGGCGAGCAGCTGCTCCAGGTCACCATGACGACCACTAGCCCTGCCCCACTGC
TGGCCGGGCCCTGGACCAAGCCCTCAGTGGCAGCCACACACCCCACCGTCCAGCACCCCCAGGGCCACAA
CTGA

Translation (327 aa):
MAPSTAVSVVSDSIKVQPLLISADNKVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQE
NPEKIAFMVALGLVTTEHLEEIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPC
WKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLA
IVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGTQSSLDRLRA
LLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHPTVQHPQGHN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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