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Report for CCDS6223.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6223.1 Public Homo sapiens 8 ZC2HC1A 24 110 108 CCDS HistoryNCBI Gene:51101Re-query CCDS DB by CCDS ID:6223.1Re-query CCDS DB by GeneID:51101See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6223.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263849.9 ENSP00000263849.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263849.9Link to Ensembl Protein Viewer:ENSP00000263849.3Re-query CCDS DB by Nucleotide ID:ENST00000263849Re-query CCDS DB by Protein ID:ENSP00000263849
Original member Current member NCBI NM_016010.3 NP_057094.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016010.3Link to Protein Sequence:NP_057094.2Re-query CCDS DB by Nucleotide ID:NM_016010Re-query CCDS DB by Protein ID:NP_057094Link to BLAST:NP_057094.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057094.2 325 Q96GY0 325 100% 0 0

Chromosomal Locations for CCDS 6223.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 78666149 78666164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 78675787 78675863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 78678563 78678679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 78686467 78686608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 78689222 78689373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 78697407 78697506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 78698414 78698513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 78715221 78715328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 78717328 78717493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGGAGGGACTGGAAGAGAATGGAGGTGTTGTCCAAGTTGGAGAATTGTTACCTTGCAAGATTTGTGGAA
GAACATTCTTTCCAGTAGCATTAAAAAAACATGGACCCATTTGCCAGAAGACTGCAACTAAAAAACGGAA
GACTTTTGATTCAAGCAGACAGAGAGCTGAAGGAACTGATATTCCAACAGTAAAACCTCTCAAACCGAGG
CCAGAACCACCAAAGAAACCATCTAATTGGAGAAGGAAACATGAAGAATTCATTGCTACCATAAGAGCAG
CTAAAGGCCTTGATCAGGCCCTCAAAGAGGGTGGCAAACTTCCTCCTCCTCCTCCACCTTCTTATGATCC
TGATTATATTCAATGTCCATATTGTCAGAGGAGATTCAATGAAAATGCAGCTGATAGACATATAAATTTC
TGTAAAGAACAGGCAGCACGTATTAGTAATAAAGGGAAATTTTCTACAGATACCAAAGGAAAACCAACTT
CTCGGACACAGGTGTATAAGCCACCCGCACTTAAAAAGTCAAATTCTCCTGGAACTGCATCATCAGGATC
TTCACGATTACCGCAGCCAAGTGGCGCTGGCAAAACTGTTGTAGGTGTTCCTTCAGGTAAAGTGTCTTCA
AGTAGCAGCTCTTTGGGAAACAAACTTCAGACCTTATCTCCCTCTCATAAAGGGATAGCAGCCCCTCATG
CAGGAGCTAATGTCAAACCCCGAAATTCCACACCACCTAGTTTGGCAAGAAATCCTGCCCCAGGTGTGCT
TACAAACAAAAGAAAAACATATACTGAGAGCTACATAGCCAGGCCAGATGGGGACTGTGCATCTTCCCTT
AATGGTGGAAATATTAAAGGCATTGAAGGACATTCACCTGGAAACTTACCAAAATTCTGCCATGAGTGTG
GGACTAAATACCCTGTAGAATGGGCCAAATTTTGCTGTGAATGTGGCATTCGAAGAATGATTCTATGA

Translation (325 aa):
MEGLEENGGVVQVGELLPCKICGRTFFPVALKKHGPICQKTATKKRKTFDSSRQRAEGTDIPTVKPLKPR
PEPPKKPSNWRRKHEEFIATIRAAKGLDQALKEGGKLPPPPPPSYDPDYIQCPYCQRRFNENAADRHINF
CKEQAARISNKGKFSTDTKGKPTSRTQVYKPPALKKSNSPGTASSGSSRLPQPSGAGKTVVGVPSGKVSS
SSSSLGNKLQTLSPSHKGIAAPHAGANVKPRNSTPPSLARNPAPGVLTNKRKTYTESYIARPDGDCASSL
NGGNIKGIEGHSPGNLPKFCHECGTKYPVEWAKFCCECGIRRMIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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