NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS62210.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
62210.1 Public Homo sapiens 17 MPP2 24 110 108 CCDS HistoryNCBI Gene:4355Re-query CCDS DB by CCDS ID:62210.1Re-query CCDS DB by GeneID:4355See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 62210.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000518766.5 ENSP00000428182.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000518766.5Link to Ensembl Protein Viewer:ENSP00000428182.1Re-query CCDS DB by Nucleotide ID:ENST00000518766Re-query CCDS DB by Protein ID:ENSP00000428182
Original member Current member NCBI NM_001278370.2 NP_001265299.1 Accepted alive Link to Nucleotide Sequence:NM_001278370.2Link to Protein Sequence:NP_001265299.1Re-query CCDS DB by Nucleotide ID:NM_001278370Re-query CCDS DB by Protein ID:NP_001265299Link to BLAST:NP_001265299.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265299.1 597 Q14168-4 597 99.665% 0 2

Chromosomal Locations for CCDS 62210.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 43877807 43877983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43879275 43879403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43879782 43879984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43880691 43880852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43881090 43881158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43881244 43881349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43881458 43881589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43882284 43882511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43882903 43883052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43883203 43883355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43898262 43898380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43904430 43904493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43909542 43909643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1794 nt):
ATGAGTTGGGCTCCACCTCCCCAGGTGGGCCAGAATCTGAGATCCCAGACTGTCCTGAGGATCCTAAATG
GAATGGAAGATTTGATGTGGGTCGCTATGGAGGAGAGACGTTTCAGAGCCCTTGCCTCCTTCACCATGCC
GGTTGCCGCCACCAACTCTGAAACTGCCATGCAGCAAGTCCTGGACAACTTGGGATCCCTCCCCAGTGCC
ACGGGGGCTGCAGAGCTGGACCTGATCTTCCTTCGAGGCATTATGGAAAGTCCCATAGTAAGATCCCTGG
CCAAGGCCCATGAGAGGCTGGAGGAGACGAAGCTGGAGGCCGTGAGAGACAACAACCTGGAGCTGGTGCA
GGAGATCCTGCGGGACCTGGCGCAGCTGGCTGAGCAGAGCAGCACAGCCGCCGAGCTGGCCCACATCCTC
CAGGAGCCCCACTTCCAGTCCCTCCTGGAGACGCACGACTCTGTGGCCTCAAAGACCTATGAGACACCAC
CCCCCAGCCCTGGCCTGGACCCTACATTCAGCAACCAGCCTGTACCTCCCGATGCTGTGCGCATGGTGGG
CATCCGCAAGACAGCCGGAGAACATCTGGGTGTAACGTTCCGCGTGGAGGGCGGCGAGCTGGTGATCGCG
CGCATTCTGCATGGGGGCATGGTGGCTCAACAAGGCCTGCTGCATGTGGGTGACATCATCAAGGAGGTGA
ACGGGCAGCCAGTGGGCAGTGACCCCCGCGCACTGCAGGAGCTCCTGCGCAATGCCAGTGGCAGTGTCAT
CCTCAAGATCCTGCCCAGCTACCAGGAGCCCCATCTGCCCCGCCAGGTATTTGTGAAATGTCACTTTGAC
TATGACCCGGCCCGAGACAGCCTCATCCCCTGCAAGGAAGCAGGCCTGCGCTTCAACGCCGGGGACTTGC
TCCAGATCGTAAACCAGGATGATGCCAACTGGTGGCAGGCATGCCATGTCGAAGGGGGCAGTGCTGGGCT
CATTCCCAGCCAGCTGCTGGAGGAGAAGCGGAAAGCATTTGTCAAGAGGGACCTGGAGCTGACACCAAAC
TCAGGGACCCTATGCGGCAGCCTTTCAGGAAAGAAAAAGAAGCGAATGATGTATTTGACCACCAAGAATG
CAGAGTTTGACCGTCATGAGCTGCTCATTTATGAGGAGGTGGCCCGCATGCCCCCGTTCCGCCGGAAAAC
CCTGGTACTGATTGGGGCTCAGGGCGTGGGACGGCGCAGCCTGAAGAACAAGCTCATCATGTGGGATCCA
GATCGCTATGGCACCACGGTGCCCTACACCTCCCGGCGGCCGAAAGACTCAGAGCGGGAAGGTCAGGGTT
ACAGCTTTGTGTCCCGTGGGGAGATGGAGGCTGACGTCCGTGCTGGGCGCTACCTGGAGCATGGCGAATA
CGAGGGCAACCTGTATGGCACACGTATTGACTCCATCCGGGGCGTGGTCGCTGCTGGGAAGGTGTGCGTG
CTGGATGTCAACCCCCAGGCGGTGAAGGTGCTACGAACGGCCGAGTTTGTCCCTTACGTGGTGTTCATCG
AGGCCCCAGACTTCGAGACCCTGCGGGCCATGAACAGGGCTGCGCTGGAGAGTGGAATATCCACCAAGCA
GCTCACGGAGGCGGACCTGAGACGGACAGTGGAGGAGAGCAGCCGCATCCAGCGGGGCTACGGGCACTAC
TTTGACCTCTGCCTGGTCAATAGCAACCTGGAGAGGACCTTCCGCGAGCTCCAGACAGCCATGGAGAAGC
TACGGACAGAGCCCCAGTGGGTGCCTGTCAGCTGGGTGTACTGA

Translation (597 aa):
MSWAPPPQVGQNLRSQTVLRILNGMEDLMWVAMEERRFRALASFTMPVAATNSETAMQQVLDNLGSLPSA
TGAAELDLIFLRGIMESPIVRSLAKAHERLEETKLEAVRDNNLELVQEILRDLAQLAEQSSTAAELAHIL
QEPHFQSLLETHDSVASKTYETPPPSPGLDPTFSNQPVPPDAVRMVGIRKTAGEHLGVTFRVEGGELVIA
RILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRNASGSVILKILPSYQEPHLPRQVFVKCHFD
YDPARDSLIPCKEAGLRFNAGDLLQIVNQDDANWWQACHVEGGSAGLIPSQLLEEKRKAFVKRDLELTPN
SGTLCGSLSGKKKKRMMYLTTKNAEFDRHELLIYEEVARMPPFRRKTLVLIGAQGVGRRSLKNKLIMWDP
DRYGTTVPYTSRRPKDSEREGQGYSFVSRGEMEADVRAGRYLEHGEYEGNLYGTRIDSIRGVVAAGKVCV
LDVNPQAVKVLRTAEFVPYVVFIEAPDFETLRAMNRAALESGISTKQLTEADLRRTVEESSRIQRGYGHY
FDLCLVNSNLERTFRELQTAMEKLRTEPQWVPVSWVY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH