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Report for CCDS6180.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6180.1 Public Homo sapiens 8 CYP7B1 24 110 108 CCDS HistoryNCBI Gene:9420Re-query CCDS DB by CCDS ID:6180.1Re-query CCDS DB by GeneID:9420See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6180.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310193.4 ENSP00000310721.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310193.4Link to Ensembl Protein Viewer:ENSP00000310721.3Re-query CCDS DB by Nucleotide ID:ENST00000310193Re-query CCDS DB by Protein ID:ENSP00000310721
Original member Current member NCBI NM_004820.5 NP_004811.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004820.5Link to Protein Sequence:NP_004811.1Re-query CCDS DB by Nucleotide ID:NM_004820Re-query CCDS DB by Protein ID:NP_004811Link to BLAST:NP_004811.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004811.1 506 O75881 506 100% 0 0

Chromosomal Locations for CCDS 6180.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 64596642 64596929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 64604682 64604857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 64615026 64615232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 64615691 64616281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 64624403 64624539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 64798466 64798587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1521 nt):
ATGGCAGGAGAAGTGTCCGCGGCCACGGGCCGCTTTTCGCTGGAGCGGTTGGGCCTCCCGGGCCTGGCCC
TCGCCGCGGCCCTGCTGCTCCTGGCCCTCTGCTTGCTTGTCCGGCGCACCAGGAGACCCGGTGAGCCTCC
ATTGATAAAAGGTTGGCTTCCTTATCTTGGAGTGGTCCTGAACTTACGAAAAGACCCCTTAAGGTTCATG
AAAACACTTCAAAAGCAACATGGTGACACTTTCACAGTTCTTCTTGGTGGAAAGTACATAACATTTATCC
TGGACCCCTTCCAGTACCAGCTAGTGATAAAAAATCATAAACAATTAAGCTTTCGAGTATTTTCTAATAA
ATTATTAGAGAAAGCATTTAGCATCAGTCAGTTGCAAAAAAATCATGACATGAATGATGAGCTTCACCTC
TGCTATCAATTTTTGCAAGGCAAATCTTTGGACATACTCTTGGAAAGCATGATGCAGAATCTAAAACAAG
TTTTTGAACCCCAGCTGTTAAAAACCACAAGTTGGGACACGGCAGAACTGTATCCATTCTGCAGCTCAAT
AATATTTGAGATCACATTTACAACTATATATGGAAAAGTTATTGTTTGTGACAACAACAAATTTATTAGT
GAGCTAAGAGATGATTTTTTAAAATTTGATGACAAGTTTGCATATTTAGTATCCAACATACCCATTGAGC
TTCTAGGAAATGTCAAGTCTATTAGAGAGAAAATTATAAAATGCTTCTCATCAGAAAAGTTAGCCAAGAT
GCAAGGATGGTCAGAAGTTTTTCAAAGCAGGCAAGATGTCCTGGAGAAATATTATGTGCACGAGGACCTT
GAAATAGGAGCACATCATTTAGGCTTTCTCTGGGCCTCTGTGGCAAACACTATTCCAACTATGTTCTGGG
CAATGTATTATCTTCTGCGGCACCCAGAAGCTATGGCAGCAGTGCGTGACGAAATTGACCGTTTGCTGCA
GTCAACAGGTCAAAAGAAAGGGTCTGGATTTCCCATCCACCTCACCAGAGAACAATTGGACAGCCTAATC
TGCCTAGAAAGCAGCATTTTTGAAGCTTTACGACTGTCCTCATATTCAACCACCATTCGTTTTGTTGAGG
AGGATTTGACTCTCAGTTCAGAGACCGGGGACTACTGTGTGCGAAAGGGAGACTTGGTAGCCATCTTTCC
TCCAGTCCTACATGGTGACCCTGAAATCTTTGAAGCTCCAGAGGAGTTTAGATATGATCGTTTTATAGAA
GATGGTAAGAAGAAAACCACCTTTTTCAAAAGAGGGAAAAAGCTGAAGTGTTACCTAATGCCGTTTGGAA
CTGGAACCAGCAAATGTCCAGGCCGATTTTTTGCACTTATGGAAATAAAACAATTGTTGGTTATACTTTT
AACTTATTTTGATTTAGAAATAATTGATGATAAGCCCATAGGACTAAACTACAGCCGCTTGTTGTTTGGT
ATTCAGTATCCAGATTCTGATGTTTTATTTAGATACAAAGTGAAATCTTAG

Translation (506 aa):
MAGEVSAATGRFSLERLGLPGLALAAALLLLALCLLVRRTRRPGEPPLIKGWLPYLGVVLNLRKDPLRFM
KTLQKQHGDTFTVLLGGKYITFILDPFQYQLVIKNHKQLSFRVFSNKLLEKAFSISQLQKNHDMNDELHL
CYQFLQGKSLDILLESMMQNLKQVFEPQLLKTTSWDTAELYPFCSSIIFEITFTTIYGKVIVCDNNKFIS
ELRDDFLKFDDKFAYLVSNIPIELLGNVKSIREKIIKCFSSEKLAKMQGWSEVFQSRQDVLEKYYVHEDL
EIGAHHLGFLWASVANTIPTMFWAMYYLLRHPEAMAAVRDEIDRLLQSTGQKKGSGFPIHLTREQLDSLI
CLESSIFEALRLSSYSTTIRFVEEDLTLSSETGDYCVRKGDLVAIFPPVLHGDPEIFEAPEEFRYDRFIE
DGKKKTTFFKRGKKLKCYLMPFGTGTSKCPGRFFALMEIKQLLVILLTYFDLEIIDDKPIGLNYSRLLFG
IQYPDSDVLFRYKVKS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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