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Report for CCDS59655.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59655.1 Public Mus musculus 4 Enho 23 108 98 CCDS HistoryNCBI Gene:69638Re-query CCDS DB by CCDS ID:59655.1Re-query CCDS DB by GeneID:69638See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59655.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000127306.1 ENSMUSP00000137902.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000127306.1Link to Ensembl Protein Viewer:ENSMUSP00000137902.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000127306Re-query CCDS DB by Protein ID:ENSMUSP00000137902
Original member Current member NCBI NM_027147.1 NP_081423.1 Accepted alive Link to Nucleotide Sequence:NM_027147.1Link to Protein Sequence:NP_081423.1Re-query CCDS DB by Nucleotide ID:NM_027147Re-query CCDS DB by Protein ID:NP_081423Link to BLAST:NP_081423.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081423.1 76 Q8K1D8 76 100% 0 0

Chromosomal Locations for CCDS 59655.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 41638612 41638842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (231 nt):
ATGGGGGCAGCCATCTCCCAAGGGGCTCTCATCGCCATCGTCTGCAATGGCCTCGTAGGCTTCTTGCTGC
TACTGCTCTGGGTCATTCTCTGCTGGGCCTGCCATTCTCGATCTGCTGACGTCGATTCTCTCTCGGAATC
CAGTCCCAACTCCAGCCCTGGCCCCTGTCCTGAGAAGGCGCCACCACCCCAGAAGCCCAGCCATGAAGGC
AGCTACCTGCTGCAGCCCTGA

Translation (76 aa):
MGAAISQGALIAIVCNGLVGFLLLLLWVILCWACHSRSADVDSLSESSPNSSPGPCPEKAPPPQKPSHEG
SYLLQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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