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Report for CCDS59422.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59422.1 Public Homo sapiens 19 DNAAF3 24 110 108 CCDS HistoryNCBI Gene:352909Re-query CCDS DB by CCDS ID:59422.1Re-query CCDS DB by GeneID:352909See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59422.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000524407.7 ENSP00000432046.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000524407.7Link to Ensembl Protein Viewer:ENSP00000432046.3Re-query CCDS DB by Nucleotide ID:ENST00000524407Re-query CCDS DB by Protein ID:ENSP00000432046
Original member Current member NCBI NM_001256715.2 NP_001243644.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001256715.2Link to Protein Sequence:NP_001243644.1Re-query CCDS DB by Nucleotide ID:NM_001256715Re-query CCDS DB by Protein ID:NP_001243644Link to BLAST:NP_001243644.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243644.1 541 Q8N9W5-1 541 100% 0 0

Chromosomal Locations for CCDS 59422.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55159062 55159449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55159533 55159607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55159899 55160013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55160640 55160775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55161065 55161187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55161293 55161418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55161643 55161825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55162133 55162290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55165370 55165463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55165858 55166000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55166329 55166413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1626 nt):
ATGACCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCGTGTCCTGGTGGGGCCTGTCCCCGGCGCTGG
ACCTGCAGGCTGAAAGTCCTCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCT
AGATGTGCTGCTTCTGGGCTCTGTGGATGGACGGCACCTGCTGCGGACCCTGTCCCGAGCGAAGTTCTGG
CCTCGCAGGAGGTTCAACTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCT
TCAGCCTAGCCCTGGAGGAACCGGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACCTTCCTGGAAGTGTG
GGGGAACGCGCTGCTGCGCCCGCCAGTGGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGCGCACCTG
GTCCCCGAGCCCGACCGCCTGGAGGAACAGCTGCCCTGGCTCAGCCTCCGCGCCCTCAAGTTCCGCGAGC
GGGATGCCCTGGAGGCCGTATTCCGCTTCTGGGCTGGCGGCGAGAAAGGGCCCCAGGCGTTCCCCATGAG
CCGCCTCTGGGACTCGCGCCTGCGCCACTACCTGGGCTCCCGCTACGACGCCCGGCGCGGTGTCAGCGAC
TGGGACCTGCGCATGAAGCTGCATGACCGCGGGGCTCAAGTCATTCACCCCCAGGAGTTCCGACGCTGGC
GGGACACAGGCGTCGCCTTTGAACTCAGGGACTCCAGCGCCTATCATGTGCCCAACCGGACCCTGGCGTC
CGGTCGCCTCCTGAGCTACCGTGGGGAGCGCGTGGCAGCGCGCGGGTACTGGGGGGACATCGCCACGGGG
CCCTTCGTGGCCTTCGGCATCGAAGCGGACGACGAGAGCCTCCTGCGGACGAGCAACGGCCAGCCAGTCA
AGACGGCCGGGGAGATCACTCAACACAACGTGACGGAGCTGCTCCGCGACGTGGCCGCCTGGGGGCGCGC
GAGAGCCACCGGGGGGGACCTGGAGGAGCAGCAGCACGCGGAGGGAAGCCCGGAGCCAGGGACTCCAGCA
GCCCCGACCCCGGAATCTTTCACCGTCCACTTCCTGCCGCTCAATTCTGCTCAGACTCTCCACCACAAGA
GCTGCTACAACGGCCGATTCCAGCTCCTCTATGTGGCCTGTGGTATGGTCCATCTTCTCATCCCTGAGCT
TGGGGCCTGTGTGGCACCCGGAGGGAACTTGATTGTGGAATTAGCCCGGTACCTGGTGGACGTGCGGCAG
GAGCAGCTGCAGGGATTCAACACCCGGGTCAGGGAGCTAGCTCAGGCAGCTGGATTTGCTCCACAGACCG
GGGCCAGGCCTTCAGAGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTGTCCC
AGCTGTGGAACCCGGAACTCCGCCCCTTGACATCCTGGCCCAGCCTCTTGAAGCCAGCAACCCAGCCCTT
GAGGGCCTGACCCAGCCTCTGCAGGGTGGGACCCCACACTGTGAGCCCTGCCAGCTGCCCTCTGAGTCTC
CAGGTTCACTCTCAGAGGTTCTGGCTCAGCCTCAGGGGGCCTTGGCTCCGCCCAACTGTGAGTCAGACTC
CAAAACTGGAGTCTGA

Translation (541 aa):
MTTPAGSGSGFGSVSWWGLSPALDLQAESPPVDPDSQADTVHSNPELDVLLLGSVDGRHLLRTLSRAKFW
PRRRFNFFVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLEVWGNALLRPPVAAFVRAQADLLAHL
VPEPDRLEEQLPWLSLRALKFRERDALEAVFRFWAGGEKGPQAFPMSRLWDSRLRHYLGSRYDARRGVSD
WDLRMKLHDRGAQVIHPQEFRRWRDTGVAFELRDSSAYHVPNRTLASGRLLSYRGERVAARGYWGDIATG
PFVAFGIEADDESLLRTSNGQPVKTAGEITQHNVTELLRDVAAWGRARATGGDLEEQQHAEGSPEPGTPA
APTPESFTVHFLPLNSAQTLHHKSCYNGRFQLLYVACGMVHLLIPELGACVAPGGNLIVELARYLVDVRQ
EQLQGFNTRVRELAQAAGFAPQTGARPSETFARFCKSQESALGNTVPAVEPGTPPLDILAQPLEASNPAL
EGLTQPLQGGTPHCEPCQLPSESPGSLSEVLAQPQGALAPPNCESDSKTGV


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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