CCDS Report for Consensus CDS

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Report for CCDS59216.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
59216.1	Public	Homo sapiens	10	ARHGAP12	24	110	108

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 59216.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000396144.8	ENSP00000379448.4		Accepted	alive
		NCBI	NM_001270695.1	NP_001257624.1		Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001257624.1	841	Q8IWW6-4	841	100%	0	0

Chromosomal Locations for CCDS 59216.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)

Genome Browser links:

Chromosome	Start	Stop
10	31807658	31807832
10	31808649	31808751
10	31808994	31809128
10	31809230	31809307
10	31810649	31810747
10	31812707	31812823
10	31814259	31814361
10	31817788	31817886
10	31820387	31820488
10	31826304	31826385
10	31831739	31831800
10	31839637	31839711
10	31843461	31843586
10	31852517	31852597
10	31854066	31854206
10	31861395	31861658
10	31908172	31908855

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2526 nt):
ATGAAAATGGCTGACAGAAGTGGGAAGATTATTCCAGGACAAGTGTATATTGAGGTGGAATATGATTATG AATATGAAGCAAAGGACAGAAAGATTGTGATAAAACAAGGGGAGAGGTACATCTTGGTGAAAAAGACCAA TGATGACTGGTGGCAAGTCAAGCCAGATGAAAACTCCAAAGCGTTTTATGTGCCAGCCCAGTATGTGAAG GAGGTCACGCGCAAAGCTCTCATGCCACCTGTTAAGCAGGTAGCTGGTCTGCCAAATAACTCCACGAAAA TAATGCAGAGTTTGCATCTTCAGAGATCAACAGAAAATGTGAACAAATTGCCTGAGCTTTCAAGTTTCGG AAAGCCATCGTCATCTGTTCAAGGAACAGGTCTTATTCGTGATGCCAATCAGAATTTTGGACCCAGTTAT AATCAAGGTCAGACTGTCAACCTAAGCCTGGACCTGACCCATAATAACGGAAAGTTTAACAATGACTCAC ATTCTCCTAAAGTTTCCAGCCAGAATAGGACACGCTCATTTGGTCATTTTCCCGGTCCAGAGTTCTTGGA TGTAGAGAAAACTAGCTTCTCCCAGGAACAATCTTGTGATTCCGCAGGAGAAGGCTCTGAAAGAATACAT CAAGATTCTGAATCTGGTGATGAACTTAGCAGCAGCTCCACTGAACAGATAAGGGCAACCACACCTCCAA ATCAAGGAAGGCCAGATTCTCCTGTCTATGCTAACCTTCAAGAACTGAAAATATCCCAGTCTGCTCTTCC CCCACTTCCTGGGAGCCCGGCAATTCAGATTAATGGAGAATGGGAAACTCATAAAGACAGCTCAGGGCGT TGCTATTACTATAACAGAGGGACACAGGAAAGAACTTGGAAACCTCCTCGTTGGACTCGGGATGCAAGCA TCAGCAAAGGAGATTTCCAAAATCCAGGGGATCAAGAGCTTCTTTCATCGGAAGAAAACTACTACAGCAC TTCTTACAGCCAGTCAGATAGTCAGTGTGGTTCTCCTCCAAGGGGTTGGTCAGAAGAGTTGGATGAACGT GGGCATACCTTATATACCAGTGACTATACTAATGAAAAGTGGCTCAAGCATGTTGATGATCAAGGTAGAC AATATTACTACAGTGCAGACGGATCTCGGTCAGAATGGGAATTGCCAAAGTATAATGCTTCATCCCAGCA GCAAAGAGAAATAATTAAAAGTAGGAGCCTGGACAGGCGGCTGCAAGAACCAATAGTATTAACAAAGTGG AGACATAGCACCATTGTATTGGACACTAATGATAAGGAATCTCCAACTGCCTCAAAACCCTGCTTTCCTG AAAATGAGTCTTCTCCCTCCTCACCAAAGCACCAAGATACAGATCAAGAGAAATATGGATTATTAAATGT AACAAAAATTGCTGAAAATGGGAAAAAGGTTCGAAAGAACTGGTTGTCTTCTTGGGCGGTGTTGCAGGGT TCATCTTTACTTTTTACCAAAACTCAAGGAAGTAGCACAAGTTGGTTTGGCAGTAATCAGTCCAAACCAG AGTTCACAGTGGACCTCAAGGGGGCAACAATTGAGATGGCTTCAAAGGATAAATCCAGCAAAAAGAATGT ATTTGAGCTGAAAACTCGTCAAGGAACAGAACTGCTAATTCAGTCTGACAATGACACTGTTATTAATGAT TGGTTTAAAGTTCTTAGTAGTACAATCAATAATCAGGCAGTAGAAACTGATGAAGGAATTGAAGAGGAGA TACCGGATTCACCAGGAATAGAAAAGCATGATAAAGAAAAGGAACAAAAGGATCCCAAAAAGCTTCGTTC CTTTAAAGTATCTAGCATAGATTCTTCAGAACAGAAAAAAACCAAGAAAAACTTAAAGAAGTTTCTTACA CGACGCCCCACTTTGCAAGCTGTTCGTGAAAAAGGTTATATTAAAGATCAGGTATTTGGATCCAATCTCG CTAATCTGTGTCAGAGAGAGAATGGCACAGTACCAAAGTTTGTGAAGTTATGTATTGAACATGTTGAAGA ACATGGTTTGGATATTGATGGGATATACAGAGTAAGTGGCAACCTCGCAGTGATCCAGAAACTAAGGTTT GCAGTCAATCATGATGAGAAATTGGACTTGAATGACAGTAAATGGGAAGATATTCATGTCATTACTGGAG CCCTCAAAATGTTTTTTCGAGAATTACCAGAACCTCTTTTTACATTTAATCATTTTAATGATTTTGTTAA TGCAATTAAGCAAGAACCAAGACAGCGAGTCGCTGCTGTTAAGGACCTAATCAGACAGTTGCCAAAGCCA AACCAAGACACAATGCAGATTCTTTTCCGACATCTCAGAAGAGTTATAGAAAATGGAGAGAAAAATCGAA TGACCTATCAGAGTATAGCAATTGTTTTTGGTCCCACTCTATTAAAACCAGAAAAAGAGACTGGTAATAT AGCAGTTCATACTGTGTACCAGAATCAGATTGTAGAATTAATTCTTCTGGAACTGAGTTCCATCTTCGGA CGTTGA
Translation (841 aa):
MKMADRSGKIIPGQVYIEVEYDYEYEAKDRKIVIKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVK EVTRKALMPPVKQVAGLPNNSTKIMQSLHLQRSTENVNKLPELSSFGKPSSSVQGTGLIRDANQNFGPSY NQGQTVNLSLDLTHNNGKFNNDSHSPKVSSQNRTRSFGHFPGPEFLDVEKTSFSQEQSCDSAGEGSERIH QDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQINGEWETHKDSSGR CYYYNRGTQERTWKPPRWTRDASISKGDFQNPGDQELLSSEENYYSTSYSQSDSQCGSPPRGWSEELDER GHTLYTSDYTNEKWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKW RHSTIVLDTNDKESPTASKPCFPENESSPSSPKHQDTDQEKYGLLNVTKIAENGKKVRKNWLSSWAVLQG SSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGATIEMASKDKSSKKNVFELKTRQGTELLIQSDNDTVIND WFKVLSSTINNQAVETDEGIEEEIPDSPGIEKHDKEKEQKDPKKLRSFKVSSIDSSEQKKTKKNLKKFLT RRPTLQAVREKGYIKDQVFGSNLANLCQRENGTVPKFVKLCIEHVEEHGLDIDGIYRVSGNLAVIQKLRF AVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVAAVKDLIRQLPKP NQDTMQILFRHLRRVIENGEKNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLELSSIFG R

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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