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Report for CCDS58853.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58853.1 Public Homo sapiens 3 ARMC8 24 110 108 CCDS HistoryNCBI Gene:25852Re-query CCDS DB by CCDS ID:58853.1Re-query CCDS DB by GeneID:25852See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58853.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000461822.5 ENSP00000420706.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000461822.5Link to Ensembl Protein Viewer:ENSP00000420706.1Re-query CCDS DB by Nucleotide ID:ENST00000461822Re-query CCDS DB by Protein ID:ENSP00000420706
Original member Current member NCBI NM_001267042.3 NP_001253971.1 Accepted alive Link to Nucleotide Sequence:NM_001267042.3Link to Protein Sequence:NP_001253971.1Re-query CCDS DB by Nucleotide ID:NM_001267042Re-query CCDS DB by Protein ID:NP_001253971Link to BLAST:NP_001253971.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001253971.1 606 Q8IUR7-8 606 100% 0 0

Chromosomal Locations for CCDS 58853.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 138187555 138187599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138209817 138209893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138221926 138221997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138223389 138223531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138223636 138223733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138228918 138229010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138235034 138235114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138237309 138237384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138237482 138237572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138239468 138239528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138245088 138245183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138263739 138263821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138264131 138264212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138267155 138267241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138270040 138270132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138272967 138273116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138274449 138274544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138284431 138284526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138289048 138289120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138290546 138290639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138295859 138295892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1821 nt):
ATGGCGTGCTTGTTGGAGACCCCAATCCGCATGAGCGTCCTTTCGGAAGTAACAGCTAGCAGTCGCCACT
ATGTTGACAGGCTATTTGACCCTGATCCCCAGAAAGTTCTACAAGGTGTCATAGACATGAAAAATGCTGT
AATTGGAAACAACAAGCAGAAAGCCAATCTCATTGTTTTAGGAGCTGTTCCAAGATTGTTGTACTTGCTT
CAGCAAGAAACCTCAAGCACAGAGCTGAAAACTGAATGTGCAGTGGTGTTGGGAAGTCTTGCTATGGGTA
CTGAAAACAATGTCAAGTCTCTACTGGACTGCCATATTATCCCTGCCTTATTGCAAGGACTACTGTCCCC
AGACCTGAAGTTTATTGAAGCTTGCCTCCGATGCCTGCGTACCATCTTCACCAGTCCTGTCACTCCAGAG
GAGCTACTGTATACAGATGCCACAGTGATACCACACCTCATGGCACTGCTTAGCAGGTCCCGCTATACCC
AGGAGTACATCTGTCAGATCTTCTCACACTGCTGTAAAGGGCCAGATCATCAAACAATTTTATTTAACCA
CGGTGCAGTTCAGAATATTGCTCACCTACTAACCTCACTGTCCTACAAAGTTCGAATGCAAGCACTGAAA
TGTTTCTCAGTTTTAGCTTTTGAAAACCCCCAGGTATCGATGACCCTGGTAAATGTTTTGGTTGATGGAG
AATTGTTACCACAGATTTTTGTGAAGATGTTACAGAGGGATAAGCCTATTGAGATGCAGCTCACATCAGC
AAAATGTTTAACTTACATGTGTAGAGCTGGAGCAATTCGGACAGATGATAACTGTATTGTATTAAAGCTT
GATCATGATTTAAAACATGCTCACGAACTCCGCCAGGCTGCATTCAAGCTCTATGCCTCTCTTGGAGCAA
ATGATGAAGACATCCGGAAGAAGATCATTGAGACTGAAAATATGATGGACCGAATTGTGACTGGCTTGTC
TGAGTCTAGTGTCAAGGTGCGGTTAGCTGCCGTCAGATGTTTGCACAGTTTATCCAGATCTGTGCAGCAG
CTTCGAACCAGTTTCCAGGATCATGCTGTTTGGAAACCTTTAATGAAGGTTTTACAAAATGCACCAGATG
AAATCCTAGTGGTAGCATCTTCCATGCTGTGTAATCTTCTTCTTGAATTTTCTCCAAGCAAAGAGCCAAT
TTTGGAATCAGGAGCCGTAGAGCTACTTTGTGGATTAACTCAGAGTGAAAATCCTGCTTTACGAGTGAAT
GGAATTTGGGCTTTAATGAATATGGCATTTCAGGCTGAACAAAAAATAAAAGCAGATATTTTACGAAGCT
TGAGTACTGAACAGCTATTCCGGTTATTATCAGATTCAGATTTGAATGTGCTGATGAAGACATTGGGACT
TCTTAGAAATCTCCTCTCCACTCGTCCTCATATAGATAAAATAATGAGTACTCATGGAAAGCAAATTATG
CAAGCCGTCACTCTTATTCTAGAAGGGGAACATAACATTGAGGTCAAAGAGCAGACACTGTGCATCTTAG
CCAACATAGCGGATGGGACAACAGCAAAAGATCTTATTATGACCAATGATGATATCCTACAGAAAATCAA
GTATTACATGGGCCATTCACATGTTAAACTGCAGCTTGCAGCCATGTTTTGTATATCAAACCTCATATGG
AATGAAGAGGAAGGTTCACAAGAACGCCAGGATAAATTACGAGACATGGGCATCGTAGATATTCTACACA
AACTGAGTCAGTCACCAGATTCAAACCTTTGTGACAAGGCAAAGATGGCACTGCAGCAGTACCTGGCATG
A

Translation (606 aa):
MACLLETPIRMSVLSEVTASSRHYVDRLFDPDPQKVLQGVIDMKNAVIGNNKQKANLIVLGAVPRLLYLL
QQETSSTELKTECAVVLGSLAMGTENNVKSLLDCHIIPALLQGLLSPDLKFIEACLRCLRTIFTSPVTPE
ELLYTDATVIPHLMALLSRSRYTQEYICQIFSHCCKGPDHQTILFNHGAVQNIAHLLTSLSYKVRMQALK
CFSVLAFENPQVSMTLVNVLVDGELLPQIFVKMLQRDKPIEMQLTSAKCLTYMCRAGAIRTDDNCIVLKL
DHDLKHAHELRQAAFKLYASLGANDEDIRKKIIETENMMDRIVTGLSESSVKVRLAAVRCLHSLSRSVQQ
LRTSFQDHAVWKPLMKVLQNAPDEILVVASSMLCNLLLEFSPSKEPILESGAVELLCGLTQSENPALRVN
GIWALMNMAFQAEQKIKADILRSLSTEQLFRLLSDSDLNVLMKTLGLLRNLLSTRPHIDKIMSTHGKQIM
QAVTLILEGEHNIEVKEQTLCILANIADGTTAKDLIMTNDDILQKIKYYMGHSHVKLQLAAMFCISNLIW
NEEEGSQERQDKLRDMGIVDILHKLSQSPDSNLCDKAKMALQQYLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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