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Report for CCDS58648.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58648.1 Public Homo sapiens 19 TGFBR3L 24 110 108 CCDS HistoryNCBI Gene:100507588Re-query CCDS DB by CCDS ID:58648.1Re-query CCDS DB by GeneID:100507588See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58648.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000565886.2 ENSP00000457962.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000565886.2Link to Ensembl Protein Viewer:ENSP00000457962.1Re-query CCDS DB by Nucleotide ID:ENST00000565886Re-query CCDS DB by Protein ID:ENSP00000457962
Original member Current member NCBI NM_001195259.2 NP_001182188.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001195259.2Link to Protein Sequence:NP_001182188.1Re-query CCDS DB by Nucleotide ID:NM_001195259Re-query CCDS DB by Protein ID:NP_001182188Link to BLAST:NP_001182188.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182188.1 316 H3BV60-2 316 100% 0 0

Chromosomal Locations for CCDS 58648.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 7916268 7916543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7916622 7916942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7917473 7917599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7917701 7917859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7918057 7918124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGGTGAATCGGCCGCCGCAACCGCATCCCTTTTCCAAAGGCGGCGGCGGGGGCGAGGTGGTCGGGTCA
CTTTTCCCGGAGGCCTAAAGGGCAGCGCGCGTTTTCTCTCCTTTGGGCCGCCCTTCCCCGCCCCGCCAGC
TCCCCCGTTCCCCGCGGCGCCCGGCCCCTGGCTGCGCAGACCCCTCTTCAGCCTGAAGCTGTCCGACACA
GAGGACGTCTTTCCTCGCCGCGCGGGGCCGCTCGAGGTCCCGGCCGACAGCCGCGTGTTCGTGCAGGCGG
CCTTGGCCCGTCCCTCCCCGCGCTGGGGCCTGGCCCTGCACCGCTGCTCAGTGACGCCGTCCTCACGCCC
GGCCCCGGGGCCCGCCCTGGCTCTGCTGCGTGAGGGCTGCCCCGCCGACACCTCTGTCGCCTTCCCGCCA
CCGCCGCCGCCGAGCCCGGGTGCCGCCCGCCCCGCGCGTTTCAGCTTCCGCCTGCGCCCGGTCTTCAACG
CCTCGGTGCAGTTCCTGCACTGCCAGCTGAGCCGCTGCCGCCGCCTCCGGGGAGTCCGCCGGGCGCCTGC
GCCTCTGACGCCGCCGCCGCCGCCGCCGCCATCGCGGTGTCTGCCTCAGGACGAGGCGTGCGCCGACACT
GGCAGTGGCAGCGCCGAGGGCCTGGCTGCTGACGGCCCCCACCTGCACACGCTGACGCAGCCTATCGTGG
TCACCGTGCCGCGGCCGCCCCCCAGGCCGCCCAAGAGTGTCCCCGGCCGTGCAGTGCGCCCTGAGCCTCC
CGCGCCGGCCCCCGCGGCCCTGGAACCCGCGCCGGTGGTGGCGCTGGTGTTGGCAGCCTTCGTGCTGGGC
GCCGCGCTGGCCGCCGGGCTGGGTCTCGTCTGTGCGCACTCAGCGCCCCACGCCCCTGGCCCGCCCGCGA
GAGCCTCGCCCAGCGGTCCCCAGCCCAGGAGGTCCCAGTGA

Translation (316 aa):
MGESAAATASLFQRRRRGRGGRVTFPGGLKGSARFLSFGPPFPAPPAPPFPAAPGPWLRRPLFSLKLSDT
EDVFPRRAGPLEVPADSRVFVQAALARPSPRWGLALHRCSVTPSSRPAPGPALALLREGCPADTSVAFPP
PPPPSPGAARPARFSFRLRPVFNASVQFLHCQLSRCRRLRGVRRAPAPLTPPPPPPPSRCLPQDEACADT
GSGSAEGLAADGPHLHTLTQPIVVTVPRPPPRPPKSVPGRAVRPEPPAPAPAALEPAPVVALVLAAFVLG
AALAAGLGLVCAHSAPHAPGPPARASPSGPQPRRSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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