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Report for CCDS58146.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58146.1 Public Homo sapiens 11 AP5B1 24 110 108 CCDS HistoryNCBI Gene:91056Re-query CCDS DB by CCDS ID:58146.1Re-query CCDS DB by GeneID:91056See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58146.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000532090.3 ENSP00000454303.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000532090.3Link to Ensembl Protein Viewer:ENSP00000454303.1Re-query CCDS DB by Nucleotide ID:ENST00000532090Re-query CCDS DB by Protein ID:ENSP00000454303
Original member Current member NCBI NM_138368.5 NP_612377.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138368.5Link to Protein Sequence:NP_612377.4Re-query CCDS DB by Nucleotide ID:NM_138368Re-query CCDS DB by Protein ID:NP_612377Link to BLAST:NP_612377.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612377.4 878 Q2VPB7 878 100% 0 0

Chromosomal Locations for CCDS 58146.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65777856 65780342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65780442 65780591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2637 nt):
ATGGGGCCCCTGAGCCGGGACGCCTGGGCCCAGCGCTTGGGGGCCTTCCGGGCCAGCCCGTCTGCCTTCA
TGGCAGGTCCCGAGGGGGAGGATTTGGGTCGCGACCTGCTGAGCGACCTGAGAAGTGAGAAGCTGAGCGA
ACAGACCAAGGTTTCCCTGCTGGCCCTGAGCATGGAGTACCCTGCGCAGCTGTGGCCCGACGCCTCTGCG
GCCGAAGTGGCCGCCACCTCCCTGTTGGACACCTTGGTCCTCCTACCCCCGCGGCCCTCAGCTCTCCGTC
GGCCACTGCTGCTGGCGGCCACCACTGCCCTGGCGGCGGGCGGCGCGCTGGGCCCCACCTCGGGCGCCTC
CTGCCGGCTCCTGCCCCTACTGCTCGGCCTGGCCGCGGGTAGCGATCTGGGGCGAGGCTTTGTCCCCGCC
TCGGAACAGCGCCCCTTGCAGGCCACGGCCTGCGAGTGCCTGCGAGAGCTAGAGAGCTGCAAGCCCGGGC
TGCTGGGGGGCTCCCTGGGGTTGCTGCGGGGCCTGCTGGGGCAGGAAGGCCCTGTCCAGCCACTCAGCCT
GTTGCTGGCCCTCGCTTTGCGCAACACCTTGGTGCTCCAGTCCCGGGTTGGGGCTGGCCTGGGGGGACTG
CTCACGGATAAGGTCTCCCCAACTGGGGGTGGTCCCTGGGATTGGACACTAGTGGAGGAGGGCGATGGAC
GCCTTCAGCCCCAGGCACCCAGCTGGCCGGCAGCTGAGGAGGGAGAGGGGGAGCGTAGCCTTACAGCACG
AGAGCACAGCCCTGAGGAGGCGCGGGAGCTGCGGGCTGCGGTGATCCAGCTTCTGGACACCTCCTATCTG
CTCACTCCTGTGGCCCAGGCCCAGCTCCTGTGGCTGCTGGGCTGGGCCCTGCGGGGTCTGCAGGGACAGC
CACCGGCACTCTTCAAGCCGCAGCTGGTACGGCTGCTAGGCACAGCACAGCTGACACTGTTGCACGCCAT
GCTTGCGCTCAAGGCGGCCTTTGGTGAGGCCTTGTTCACAGCCCAGGATGAAGCGTTGCTGCTCCGCCGG
CTCACCTTGGCTGCCCAGCACCCTGCTCTGCCTCCGCCCACCCATCTCTTTTACCTTCACTGCGTCCTGA
GCTTCCCTGAGAACTGGCCGCTGGGCCCTGAAGGTGAGGAGGCTGCCCCACTGCTGCTAGGGCCCCAGCT
ATGCCGTGGTCTCCTGCCCAGTCTCCTGCATGACCCAATGGCCCTCCTGGCCCGCCTGCATTTACTGTGC
CTGCTCTGTGCCGAGGAGGAAGAAGAGGAGAAAGGCCAGCTTCCAAGCCCACGGCACTACCTGGAAGAGC
TGCTGGCTGGCTTGCGGCAGCGGGCAGCCCTGGATGGGGGCCCCCGGGCCTTGGCCACTCTCTGCTTCCA
GGCCTCGTATCTGGTGGCCTGCTGCCTGGCTGGGCAACCTACGGTGCTGACCCCCTTGATCCACGGACTG
GCCCAGCTGTACCAAGCCCGGCCCATGCTGGCTCCCCACTTTGTGGACCTCTTGGATCAGGTGGACTCTG
AGCTGAGGGAGCCCCTGAAGGTGGTGTTGCGGCAGGTGGTGGTGTCCAGGCCGGGCAGGGATGAAGCTCT
TTGCTGGCACCTGCAAATGCTGGCAAAGGTGGCAGATGGAGATGCCCAGAGTGCTACCCTCAACTTTCTA
CAGGCCGCGGCTGCCCACTGCACGAACTGGGACCTACAGCAGGGCCTGCTGCGGGTCTGCCGGGCGCTGC
TGCGGGCAGGGGTGAGGGGCGGCCTGGTCGACTTGCTGCAGGTGCTGGCCAGGCAGCTGGAGGACCCTGA
TGGGCGTGACCACGCCCGCCTCTACTACATCCTGCTGGCACACCTGGCAGCACCCAAGTTGGGGGTGGCC
CTGGGCCCCTCGCTTGCCGCACCTGCACTGGCCTCTTCACTGGTGGCCGAGAACCAGGGCTTTGTGGCAG
CACTGATGGTGCAGGAGGCACCGGCCCTGGTACGGCTGAGCCTGGGGTCCCATCGGGTCAAGGGCCCACT
CCCAGTGTTGAAGCTCCAGCCGGAGGCGCTGGAGCCCATCTACTCTCTGGAGCTGCGCTTCCGTGTGGAA
GGACAGCTGTATGCACCCCTGGAGGCTGTCCATGTGCCCTGCCTGTGTCCTGGCCGCCCTGCCCGCCCTC
TGCTCCTGCCTCTGCAGCCCCGATGCCCGGCCCCCGCACGGCTGGATGTCCATGCCCTTTACACCACATC
CACTGGTCTCACGTGCCATGCCCACTTGCCACCCCTGTTCGTGAACTTTGCCGACCTCTTTCTGCCTTTC
CCGCAGCCTCCAGAGGGGGCCGGGCTGGGCTTCTTTGAGGAGCTCTGGGATTCCTGCCTGCCAGAGGGTG
CTGAGAGTCGTGTGTGGTGTCCACTTGGGCCACAGGGCCTGGAGGGCTTGGTGTCCCGCCACCTGGAGCC
TTTTGTGGTGGTGGCCCAGCCTCCTACCAGCTACTGTGTAGCAATCCACCTGCCCCCGGACTCAAAGCTG
CTGCTGCGGCTGGAGGCGGCCCTGGCAGATGGAGTGCCTGTGGCCCTGCGGACCGATGACTGGGCCGTGC
TGCCCCTGGCGGGGGACTACCTCCGTGGGCTGGCGGCTGCTGTCTGA

Translation (878 aa):
MGPLSRDAWAQRLGAFRASPSAFMAGPEGEDLGRDLLSDLRSEKLSEQTKVSLLALSMEYPAQLWPDASA
AEVAATSLLDTLVLLPPRPSALRRPLLLAATTALAAGGALGPTSGASCRLLPLLLGLAAGSDLGRGFVPA
SEQRPLQATACECLRELESCKPGLLGGSLGLLRGLLGQEGPVQPLSLLLALALRNTLVLQSRVGAGLGGL
LTDKVSPTGGGPWDWTLVEEGDGRLQPQAPSWPAAEEGEGERSLTAREHSPEEARELRAAVIQLLDTSYL
LTPVAQAQLLWLLGWALRGLQGQPPALFKPQLVRLLGTAQLTLLHAMLALKAAFGEALFTAQDEALLLRR
LTLAAQHPALPPPTHLFYLHCVLSFPENWPLGPEGEEAAPLLLGPQLCRGLLPSLLHDPMALLARLHLLC
LLCAEEEEEEKGQLPSPRHYLEELLAGLRQRAALDGGPRALATLCFQASYLVACCLAGQPTVLTPLIHGL
AQLYQARPMLAPHFVDLLDQVDSELREPLKVVLRQVVVSRPGRDEALCWHLQMLAKVADGDAQSATLNFL
QAAAAHCTNWDLQQGLLRVCRALLRAGVRGGLVDLLQVLARQLEDPDGRDHARLYYILLAHLAAPKLGVA
LGPSLAAPALASSLVAENQGFVAALMVQEAPALVRLSLGSHRVKGPLPVLKLQPEALEPIYSLELRFRVE
GQLYAPLEAVHVPCLCPGRPARPLLLPLQPRCPAPARLDVHALYTTSTGLTCHAHLPPLFVNFADLFLPF
PQPPEGAGLGFFEELWDSCLPEGAESRVWCPLGPQGLEGLVSRHLEPFVVVAQPPTSYCVAIHLPPDSKL
LLRLEAALADGVPVALRTDDWAVLPLAGDYLRGLAAAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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