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Report for CCDS57671.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57671.1 Public Mus musculus 9 Or8c11 23 108 98 CCDS HistoryNCBI Gene:404313Re-query CCDS DB by CCDS ID:57671.1Re-query CCDS DB by GeneID:404313See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 57671.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072731.3 ENSMUSP00000072514.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072731.3Link to Ensembl Protein Viewer:ENSMUSP00000072514.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000072731Re-query CCDS DB by Protein ID:ENSMUSP00000072514
Original member Current member NCBI NM_207553.2 NP_997436.2 Accepted alive Link to Nucleotide Sequence:NM_207553.2Link to Protein Sequence:NP_997436.2Re-query CCDS DB by Nucleotide ID:NM_207553Re-query CCDS DB by Protein ID:NP_997436Link to BLAST:NP_997436.2

Chromosomal Locations for CCDS 57671.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 38377883 38378833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGAAAGTCATGAAGCAAATGGTTACAGAAAGTAATTCTTCAGTGACTGAGTTCATTCTTATGGGATTAA
CAGTTCAAAAAGAGCTCCAGTTGCCTCTGTTCATCCTATTCTTGTTAAACTACACAGCCACTGTGGTAGG
AAACCTGAGCTTAATGAATCTCATTTGCCTAAATTCACATCTTCACACTCCCATGTACTTTTTCATCTTC
AATCTGTCCTGCATTGATTTTTGTTATTCATTTGTTTCTAACCCCACAATGCTGAGGAGTTTTGTTACAG
AGCAGAACACCATATCCTATGAAGGATGCATGAGTCAACTATTTTTCTTCTGCTTTTTTGTAAACTCTGA
ATGTTATGTGCTGACAGCCATGGCCTATGATCGCTACGTGGCCATCTGTCATCCCCTCAAGTACACAACT
GTCATGTCTCCTAAGATCTGCTGTCTGCTGGTGTTTGGTTCTTACTTGATGGGTTTTGCTGGTGCCCTGA
CTCATACAGGGTTTATGATCAGGCTCAGTTTTTGTAATTCTAACATCATCAACCACTACATGTGTGACAT
CTTTCCCCTCCTTCAGCTCTCTTGTACTAGCACCTATGTCAACGAGCTTGTGAGCTCTGCTGTAGTTGGA
ACAATTATCATTTTATCTAGCATCATTATTTTAGTCTCATATGCTATGATCCTTTCCAATATCCTTCATA
TGTCATCAAGTAAGGGTTGGTCAAAAGCCCTGGGCACTTGTGGGTCCCACATCATAACTGTTAGCCTCTT
TTATGGGTCTGGATTGCTTGCCTATATCAAGCCAACATCTGCTGAGACTGTGGACCAGGGGAAATTTTTA
TCAATATTTTACACCCTTGTGGTACCCATGCTGAATCCTCTCATTTACAGCCTCAGAAACAAGGATGTCA
AACTTGCTCTGAAGAGAACAATGAAAAGAGTCACAACCTGA

Translation (316 aa):
MKVMKQMVTESNSSVTEFILMGLTVQKELQLPLFILFLLNYTATVVGNLSLMNLICLNSHLHTPMYFFIF
NLSCIDFCYSFVSNPTMLRSFVTEQNTISYEGCMSQLFFFCFFVNSECYVLTAMAYDRYVAICHPLKYTT
VMSPKICCLLVFGSYLMGFAGALTHTGFMIRLSFCNSNIINHYMCDIFPLLQLSCTSTYVNELVSSAVVG
TIIILSSIIILVSYAMILSNILHMSSSKGWSKALGTCGSHIITVSLFYGSGLLAYIKPTSAETVDQGKFL
SIFYTLVVPMLNPLIYSLRNKDVKLALKRTMKRVTT


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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