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Report for CCDS57579.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57579.1 Public Mus musculus 7 Cyb5r2 23 108 98 CCDS HistoryNCBI Gene:320635Re-query CCDS DB by CCDS ID:57579.1Re-query CCDS DB by GeneID:320635See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57579.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052438.7 ENSMUSP00000050061.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052438.7Link to Ensembl Protein Viewer:ENSMUSP00000050061.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000052438Re-query CCDS DB by Protein ID:ENSMUSP00000050061
Original member Current member NCBI NM_001205227.1 NP_001192156.1 Accepted alive Link to Nucleotide Sequence:NM_001205227.1Link to Protein Sequence:NP_001192156.1Re-query CCDS DB by Nucleotide ID:NM_001205227Re-query CCDS DB by Protein ID:NP_001192156Link to BLAST:NP_001192156.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001192156.1 292 Q3KNK3-2 292 100% 0 0

Chromosomal Locations for CCDS 57579.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 107750224 107750396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107751167 107751266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107752331 107752416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107753216 107753347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107753846 107753975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107754704 107754810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107756911 107756983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107757185 107757262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGAGTGTCAAGAAGAAAGATCTTATCACCTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCTTGATTG
AGAAGGAGCAAATCAGTCACAACACCAGAAGGTTCCGCTTTGGGCTGCCCTCACCAGACCATGTCCTGGG
GCTTCCTGTCGGTAACTATGTCCATCTCTTGGCACAAATTAACAATGAATTGGTGATCAGGGCTTACACA
CCTGTCTCCAGTGACGATGATCAAGGCTTTGTGGACTTAATTATAAAGATCTACTTCAAAAATGTGCACC
CCAAGTATCCTGAAGGAGGAAAGATGACTCAGTACTTGGAGAACATGAAAATTGGGGATACCATCCTTTT
TCGGGGGCCAACAGGGCGCCTGTTCTACAATGAGCCAGGCTGCCAGACAAGGGCTGCAGAAGTCAAAAAC
ATCTTTATATTTCTAGGAACCCTTTTAATCAAAGCAAACAAAACAAGTGAGCCTGAAAAAAAGCTGGTTC
ACCACCTGGGGATGATTGCTGGAGGCACAGGCATTACGCCCATGCTACAGCTGATTCGCCACATCACCAA
GGACACCAGCGATGAGACCAGGATGTCCCTCCTCTTTGCTAACCAGACAGAAGAGGATATCTTGCTGAGA
AAGGAGCTAGAAGAAGTCGCCACGACTCATCACAAACAGTTCAACCTGTGGTATACCCTGGACAGGCCTC
CCAGTGACTGGAAGTACAGCTCAGGCTTTGTTAGCGCTGACATGATCAAGGAGCACCTCCCTCCTCCTGG
GGAGGACACGCTCATCCTGGTGTGTGGCCCACCACCTCTGATCCAGGCGGCAGCTCACCCCAGCCTGGAG
CAGCTCAGCTATACCAAGGACATGATTTTTATCTACTAA

Translation (292 aa):
MSVKKKDLITLQDPEAKYPLPLIEKEQISHNTRRFRFGLPSPDHVLGLPVGNYVHLLAQINNELVIRAYT
PVSSDDDQGFVDLIIKIYFKNVHPKYPEGGKMTQYLENMKIGDTILFRGPTGRLFYNEPGCQTRAAEVKN
IFIFLGTLLIKANKTSEPEKKLVHHLGMIAGGTGITPMLQLIRHITKDTSDETRMSLLFANQTEEDILLR
KELEEVATTHHKQFNLWYTLDRPPSDWKYSSGFVSADMIKEHLPPPGEDTLILVCGPPPLIQAAAHPSLE
QLSYTKDMIFIY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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