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Report for CCDS57063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57063.1 Public Mus musculus 17 Actl9 23 108 98 CCDS HistoryNCBI Gene:69481Re-query CCDS DB by CCDS ID:57063.1Re-query CCDS DB by GeneID:69481See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 57063.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000174088.2 ENSMUSP00000134564.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000174088.2Link to Ensembl Protein Viewer:ENSMUSP00000134564.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000174088Re-query CCDS DB by Protein ID:ENSMUSP00000134564
Original member Current member NCBI NM_183282.2 NP_899105.2 Accepted alive Link to Nucleotide Sequence:NM_183282.2Link to Protein Sequence:NP_899105.2Re-query CCDS DB by Nucleotide ID:NM_183282Re-query CCDS DB by Protein ID:NP_899105Link to BLAST:NP_899105.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_899105.2 415 Q8CG27 415 100% 0 0

Chromosomal Locations for CCDS 57063.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 33432968 33434215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1248 nt):
ATGGATGTCAATGGACACCCAAAGTTCCAGCCCTCCCCAGAGACTGATGGGCCTCTTCCCCTGACCTCTA
GTACACTCATGGTGAGCAAGAGTCTACAGCAAGATTCCCTCAGTATGGTGGGAGACAGGCTCCCACCAAA
AACTGGTGCTGTGGTTATTGACATGGGCACAGGCACCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCC
ACCTACACGGTGGCCACCATCCTGGGTTGCCAGCCCAAGAAACAGGCTACCAAGGACCAGTCGGAGCTGG
AAACTTTTATTGGGGAGGCCGCCCGCTCCCGGCCAGAACTGAGGTTGGTGAAGCCTATTCGCAATGGCAT
TGTGGTGGACTGGGAAGCTGCGGAACTAATATGGAGACACATCTTGGAACATGATCTCCAAGTAGCCACC
CATGAGCACCCTCTACTGTTTTCAGATCCACCCTTCAGCCCTGCCACCAACCGAGAAAAGCTAGTAGAAG
TGGCCTTTGAGTCTCTGCACTCCCCAGCCTTATATGTGGCATCTCAATCTGTATTGTCAGTCTATGCTCA
CGGGCGTGTCAATGGACTTGTTGTGGACACCGGCCATGGAGTCAGCTACACGGTGCCAGTTGTTCAGGGT
TACAACCTACCCCATGCCATCCAACGCTTGGACCTGGCAGGAAACCATCTTACTGCCTTCCTAGCAGAGA
TGCTCCTGGGCTCTGGCTTCTCGTTGCAACAGGAGGACCTGGACTTGGTGGAGAACATCAAACATCATTA
CTGCTATTTGGCCCCAGATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAATCCCTGAAG
CTTCCTGATGGACGGACTGTCACTCTGGGAAAGGAGTTATTCCAGTGCCCAGAGCTCCTATTCCATCCCC
CGGAGATTCCAGGATTGTCGCCCATCGGCCTCCCAGCCATGGCTGAACAGAGCCTCCTCAAGGTGCCTCA
GGAGCTACGGCCTCATGTGGCCCGGAATGTGATACTATGCGGAGGCTCCTCACTCTTCACCGGCCTGGAG
GGTCGCTTCAGGGCAGAGCTACTGCATTCTCTATCCCCTGAGGACCACGTAGTGGTGATGGCACACCCCA
ACAGGAACCTCTCTGTGTGGATTGGGGGCTCCATTCTAGCCTCATTGCATGCTTTCCAGTCCTGTTGGGT
CCTACGGGAACAATATGAAGAAAGGGGACCCCAGGTTGTATACCGAAAATGCTACTAA

Translation (415 aa):
MDVNGHPKFQPSPETDGPLPLTSSTLMVSKSLQQDSLSMVGDRLPPKTGAVVIDMGTGTCKVGFAGQSQP
TYTVATILGCQPKKQATKDQSELETFIGEAARSRPELRLVKPIRNGIVVDWEAAELIWRHILEHDLQVAT
HEHPLLFSDPPFSPATNREKLVEVAFESLHSPALYVASQSVLSVYAHGRVNGLVVDTGHGVSYTVPVVQG
YNLPHAIQRLDLAGNHLTAFLAEMLLGSGFSLQQEDLDLVENIKHHYCYLAPDFQKEQARPDEECKQSLK
LPDGRTVTLGKELFQCPELLFHPPEIPGLSPIGLPAMAEQSLLKVPQELRPHVARNVILCGGSSLFTGLE
GRFRAELLHSLSPEDHVVVMAHPNRNLSVWIGGSILASLHAFQSCWVLREQYEERGPQVVYRKCY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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