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Report for CCDS56785.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56785.1 Public Mus musculus 11 4930544D05Rik 23 108 98 CCDS HistoryNCBI Gene:668433Re-query CCDS DB by CCDS ID:56785.1Re-query CCDS DB by GeneID:668433See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56785.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000144960.1 ENSMUSP00000136077.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000144960.1Link to Ensembl Protein Viewer:ENSMUSP00000136077.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000144960Re-query CCDS DB by Protein ID:ENSMUSP00000136077
Original member Current member NCBI NM_001145537.1 NP_001139009.1 Accepted alive Link to Nucleotide Sequence:NM_001145537.1Link to Protein Sequence:NP_001139009.1Re-query CCDS DB by Nucleotide ID:NM_001145537Re-query CCDS DB by Protein ID:NP_001139009Link to BLAST:NP_001139009.1

Chromosomal Locations for CCDS 56785.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 70615939 70616004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70616104 70616304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70616398 70616605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70616758 70616798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (516 nt):
ATGAAGGGGATTCCCAGCAATTTGGACACCCTGCTGTGGGTCTACCACTTCCACAGCTCCACCGAGGTGG
CC
TTACAGCCTCCACTTCTATCTTCCCTGGAACTTGCTGTGGCCGCAGCTCACGAATATCTGGTGCAAAG
G
TTCAGAGAGCTTAAGTCCCAGGACCCCCTGGAATCCGACAAGTCGCCCACCCAGAAGGCCACCCTAGGG
CTG
GTGCTAAGAGAAGCTGCAGCCAGCATCATGAGCTTTGGAGCCACCTTGTTAGAGATCTCGGCCCTGT
GG
CTGCAGCAGGAGGTGCAGCGACTGGACGGCGGCAACGACTGCCCAGGCCCAGCCCCAGACACTGGGGA
T
CCTGGTAGGGCGCTGGCCCGTGTAGCCCTGGCCGCAGGGCAGGGGATTCGGCAAGCTGGAACGGCAGCT
GGC
GCAAGTGCCCGGTACCTGATCCAGGGGGCGTGGTTGTACCTGTGTGGACGAGAGAGACTCGGGAAAC
CT
CAAGGTGTCGCCCAGCAGCAGTGA


Translation (171 aa):
MKGIPSNLDTLLWVYHFHSSTEVALQPPLLSSLELAVAAAHEYLVQRFRELKSQDPLESDKSPTQKATLG
L
VLREAAASIMSFGATLLE
ISALWLQQEVQRLDGGNDCPGPAPDTGDPGRALARVALAAGQGIRQAGTAA
G
ASARYLIQGAWLYLCGR
ERLGKPQGVAQQQ



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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