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Report for CCDS56783.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56783.1 Public Mus musculus 11 Tmem95 23 108 98 CCDS HistoryNCBI Gene:100503361Re-query CCDS DB by CCDS ID:56783.1Re-query CCDS DB by GeneID:100503361See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56783.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000178597.2 ENSMUSP00000137492.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178597.2Link to Ensembl Protein Viewer:ENSMUSP00000137492.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178597Re-query CCDS DB by Protein ID:ENSMUSP00000137492
Original member Current member NCBI NM_001195710.2 NP_001182639.1 Accepted alive Link to Nucleotide Sequence:NM_001195710.2Link to Protein Sequence:NP_001182639.1Re-query CCDS DB by Nucleotide ID:NM_001195710Re-query CCDS DB by Protein ID:NP_001182639Link to BLAST:NP_001182639.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182639.1 176 P0DJF3 176 100% 0 0

Chromosomal Locations for CCDS 56783.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 69876684 69876714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69876787 69876874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69876961 69877041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69877181 69877201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69877299 69877379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69877540 69877596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69877847 69878018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGTGGGTGCTGGCTCTGGGTGGGGCTTTCTTGGCCGTGGCCAAGGCTTGTATCTTCTGTCGTCTCCAAG
ATCATGCCTTGGCAAACCGCCTGGCTCAGCTCAATAACCAGACGAAGCCGAAGTGGAAATGGAAGGAATG
GGCTTCCCCAGATTTCTCGGCCTTTGCCTTAGATGAGGTCTCAATGAAGCAAGTCACAGAGAAAACTCAC
CGAGTCCTGAGAGTCATAGAGAAAAAAGGATCCACCTCCTTGATTCCATTATACTGGCAATGGCTTCAGA
AGACCAGGATCCCCCAGTACACCAGGGAAGCTCTTTGTGCTCCTGTCTGCCGGGGCAGCACCATCCTGTA
CAACTGCTCCACCTGCGAGGGCAAGGAGGAGTCTTGTTGGCCCCAAAAGCACTGCTACCCAGACAGTCAC
GATCTGTGGGACGCTAGGATTCTGCTCCTATGTATCTTCGGAATTGTCCTGCTTTCGGGTGTTGTGAGCC
TCCAAGTGGAGTACCTGAACCTGCAAGCAAAAGACTTGTGA

Translation (176 aa):
MWVLALGGAFLAVAKACIFCRLQDHALANRLAQLNNQTKPKWKWKEWASPDFSAFALDEVSMKQVTEKTH
RVLRVIEKKGSTSLIPLYWQWLQKTRIPQYTREALCAPVCRGSTILYNCSTCEGKEESCWPQKHCYPDSH
DLWDARILLLCIFGIVLLSGVVSLQVEYLNLQAKDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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