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Report for CCDS56736.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56736.1 Public Mus musculus 10 Oaz1 23 108 98 CCDS HistoryNCBI Gene:18245Re-query CCDS DB by CCDS ID:56736.1Re-query CCDS DB by GeneID:18245See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)


Attributes
Ribosomal slippage (translational frameshift)

Sequence IDs included in CCDS 56736.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000180036.7 ENSMUSP00000137400.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000180036.7Link to Ensembl Protein Viewer:ENSMUSP00000137400.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000180036Re-query CCDS DB by Protein ID:ENSMUSP00000137400
Original member Current member NCBI NM_008753.4 NP_032779.2 Accepted alive Link to Nucleotide Sequence:NM_008753.4Link to Protein Sequence:NP_032779.2Re-query CCDS DB by Nucleotide ID:NM_008753Re-query CCDS DB by Protein ID:NP_032779Link to BLAST:NP_032779.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032779.2 227 P54369-1 227 100% 0 0

Chromosomal Locations for CCDS 56736.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80826760 80826905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80828237 80828294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80828296 80828382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80828461 80828633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80828711 80828796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80828871 80829004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (684 nt):
ATGGTGAAATCCTCCCTGCAGCGGATCCTCAACAGCCACTGCTTCGCCAGAGAGAAGGAAGGGGACAAAC
GCAGCGCCACGCTTCACGCCAGCCGCACCATGCCGCTTCTTAGTCAGCACAGCCGCGGCGGCTGCAGCAG
CGAGAGTTCTAGGGTTGCCCTTAATTGCTGTAGTAACCTGGGTCCGGGGCCTCGGTGGTGCTCCGATGTC
CCTCACCCACCCCTGAAGATCCCAGGTGGGCGAGGGAACAGTCAGCGGGATCACAGTCTTTCAGCTAGCA
TCCTGTACTCCGACGAGCGGCTGAATGTGACAGAGGAGCCGACGTCTAACGACAAGACCAGGGTCCTGAG
CATCCAGTCCACGCTCACGGAGGCCAAGCAGGTCACCTGGAGGGCGGTGTGGAGTGGTGGTGGCCTCTAC
ATCGAGCTCCCAGCTGGACCTCTGCCTGAGGGCAGTAAGGACAGTTTTGCAGCTCTCCTAGAGTTCGCAG
AGGAGCAACTCCAGGCTGACCACGTTTTCATCTGCTTCCCCAAGAACCGTGAGGACAGAGCCGCCCTACT
CCGAACCTTCAGCTTTCTTGGCTTTGAGATTGTGAGACCCGGGCATCCCCTTGTCCCCAAGAGACCCGAC
GCTTGCTTCATGGTCTACACTCTGGAGAGAGAGGACCCGGGTGAGGAGGACTAG

Translation (227 aa):
MVKSSLQRILNSHCFAREKEGDKRSATLHASRTMPLLSQHSRGGCSSESSRVALNCCSNLGPGPRWCSDV
PHPPLKIPGGRGNSQRDHSLSASILYSDERLNVTEEPTSNDKTRVLSIQSTLTEAKQVTWRAVWSGGGLY
IELPAGPLPEGSKDSFAALLEFAEEQLQADHVFICFPKNREDRAALLRTFSFLGFEIVRPGHPLVPKRPD
ACFMVYTLEREDPGEED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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