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Report for CCDS56642.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56642.1 Public Mus musculus 1 Nuak2 23 108 98 CCDS HistoryNCBI Gene:74137Re-query CCDS DB by CCDS ID:56642.1Re-query CCDS DB by GeneID:74137See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56642.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072177.13 ENSMUSP00000072039.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072177.13Link to Ensembl Protein Viewer:ENSMUSP00000072039.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000072177Re-query CCDS DB by Protein ID:ENSMUSP00000072039
Original member NCBI NM_001195025.1 NP_001181954.1 Updated not alive Link to Nucleotide Sequence:NM_001195025.1Link to Protein Sequence:NP_001181954.1Re-query CCDS DB by Nucleotide ID:NM_001195025Re-query CCDS DB by Protein ID:NP_001181954
Current member NCBI NM_001195025.2 NP_001181954.1 Accepted alive Link to Nucleotide Sequence:NM_001195025.2Link to Protein Sequence:NP_001181954.1Re-query CCDS DB by Nucleotide ID:NM_001195025Re-query CCDS DB by Protein ID:NP_001181954Link to BLAST:NP_001181954.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001181954.1 639 Q8BZN4-1 639 100% 0 0

Chromosomal Locations for CCDS 56642.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 132316230 132316472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132324953 132325073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132326206 132326229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132327697 132327848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132328131 132328196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132329958 132330077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132330559 132330691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132331321 132332381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1920 nt):
ATGGAGTCGGTGGCCTTACTCCAGCGCCCGAGCCAGGCTCCCTCGGCCTCCGCCCTGGCCTCGGAGAGCG
CCCGGCCGCTGGCGGACGGGCTCATCAAGTCGCCTAAACCTCTGATGAAGAAGCAGGCGGTGAAGCGGCA
CCATCACAAACACAACCTGCGGCACCGCTACGAGTTCCTGGAGACGCTGGGCAAGGGCACCTACGGGAAG
GTGAAGAAGGCACGAGAGAGCTCGGGGCGTCTGGTGGCCATCAAGTCCATCAGGAAAGACAAAATCAAAG
ATGAGCAGGATCTGCTGCACATACGGAGGGAGATTGAGATCATGTCTTCACTCAACCACCCCCACATCAT
TGCCATCCATGAAGTGGGCAGATCACGCTTAGTGACTGTGTTTGAGAATAGCAGCAAGATTGTGATTGTC
ATGGAGTATGCCAGCCGAGGCGATCTGTATGATTACATCAGTGAGCGGCCACGGCTGAGTGAGCGGGACG
CCAGGCATTTCTTCCGACAGATCGTGTCTGCCCTGCACTACTGCCACCAGAACGGGATCGTTCACCGAGA
TCTCAAGCTGGAAAACATCCTTCTAGATGCCAATGGAAACATCAAGATTGCTGACTTTGGCCTCTCCAAC
CTGTACCACAAAGGCAAGTTCCTCCAGACGTTCTGTGGGAGCCCTCTCTACGCCTCGCCTGAGATAGTCA
ACGGGAAGCCCTATGTGGGCCCAGAGGTGGACAGCTGGTCTCTGGGCGTTCTCCTGTACATCCTGGTGCA
TGGCACCATGCCCTTTGACGGGCAGGATCATAAAACACTGGTGAAGCAAATCAGTAACGGGGCTTACCGT
GAGCCGCCCAAGCCGTCCGATGCCTGTGGCCTGATCCGGTGGCTGTTAATGGTGAACCCCACCCGTCGGG
CCACACTGGAGGATGTAGCCAGTCATTGGTGGGTCAACTGGGGTTACACCACCGGAGTCGGGGAACAGGA
AGCCCTGCGTGAGGGTGGGCACCCTAGTGGTGACTTTGGCCGGGCCTCCATGGCGGACTGGTTACGTCGC
TCCTCGCGCCCCCTCCTGGAGAATGGAGCCAAGGTGTGCAGCTTCTTCAAGCAGCACGTGCCGGGAGGTG
GAAGCACTGTACCTGGGCTGGAGCGGCAACATTCTCTTAAGAAGTCCCGAAAGGAGAATGACATGGCTCA
AAATCTGCAAGGTGACCCGGCTGAGGATACCTCTTCTCGCCCTGGCAAGAGCAGCCTTAAGCTTCCGAAA
GGCATTCTCAAGAAAAAGTCCTCTACCTCGTCAGGGGAGGTACAGGAGGACCCTCAGGAACTCAGACCGG
TGCCTGATACTCCAGGGCAGCCTGTCCCTGCTGTATCCCTGCTCCCAAGGAAAGGCATCCTTAAGAAGTC
TCGACAGCGTGAATCTGGTTACTACTCCTCTCCAGAGCCCAGCGAGTCTGGGGAACTCTTAGACGCCAGT
GATGTGTTTGTGAGTGGGGACCCCGTGGAGCAGAAGTCTCCACAGGCTTCAGGGCTCCTCCTCCACCGCA
AGGGCATTCTCAAACTCAATGGCAAGTTCTCCCGCACAGCCTTAGAAGGCACTACCCCTAGCACCTTTGG
CTCCCTGGACCAACTGGCCTCCTCCCATCCTGCAGCCCGGCCCAGCCGCCCCTCAGGGGCTGTGAGTGAG
GACAGCATCCTGTCCTCCGAGTCCTTTGACCAATTGGACTTGCCTGAACGTCTTCCCGAAACCCCACTGA
GGGGCTGTGTGTCTGTGGACAACCTGAGGGGGCTTGAGCAGCCTCCCTCAGAAGGTCTGAAGCGATGGTG
GCAGGAATCCTTGGGGGATAGCTGCTTTTCTCTGACAGACTGCCAAGAGGTGACTGCAGCCTACAGACAA
GCCCTAGGAATCTGCTCAAAGCTCAGCTGA

Translation (639 aa):
MESVALLQRPSQAPSASALASESARPLADGLIKSPKPLMKKQAVKRHHHKHNLRHRYEFLETLGKGTYGK
VKKARESSGRLVAIKSIRKDKIKDEQDLLHIRREIEIMSSLNHPHIIAIHEVGRSRLVTVFENSSKIVIV
MEYASRGDLYDYISERPRLSERDARHFFRQIVSALHYCHQNGIVHRDLKLENILLDANGNIKIADFGLSN
LYHKGKFLQTFCGSPLYASPEIVNGKPYVGPEVDSWSLGVLLYILVHGTMPFDGQDHKTLVKQISNGAYR
EPPKPSDACGLIRWLLMVNPTRRATLEDVASHWWVNWGYTTGVGEQEALREGGHPSGDFGRASMADWLRR
SSRPLLENGAKVCSFFKQHVPGGGSTVPGLERQHSLKKSRKENDMAQNLQGDPAEDTSSRPGKSSLKLPK
GILKKKSSTSSGEVQEDPQELRPVPDTPGQPVPAVSLLPRKGILKKSRQRESGYYSSPEPSESGELLDAS
DVFVSGDPVEQKSPQASGLLLHRKGILKLNGKFSRTALEGTTPSTFGSLDQLASSHPAARPSRPSGAVSE
DSILSSESFDQLDLPERLPETPLRGCVSVDNLRGLEQPPSEGLKRWWQESLGDSCFSLTDCQEVTAAYRQ
ALGICSKLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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