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Report for CCDS56443.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56443.1 Public Homo sapiens 6 ANKRD6 24 110 108 CCDS HistoryNCBI Gene:22881Re-query CCDS DB by CCDS ID:56443.1Re-query CCDS DB by GeneID:22881See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56443.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000520793.5 ENSP00000429782.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520793.5Link to Ensembl Protein Viewer:ENSP00000429782.1Re-query CCDS DB by Nucleotide ID:ENST00000520793Re-query CCDS DB by Protein ID:ENSP00000429782
Original member Current member NCBI NM_001242814.1 NP_001229743.1 Accepted alive Link to Nucleotide Sequence:NM_001242814.1Link to Protein Sequence:NP_001229743.1Re-query CCDS DB by Nucleotide ID:NM_001242814Re-query CCDS DB by Protein ID:NP_001229743Link to BLAST:NP_001229743.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229743.1 663 Q9Y2G4-4 663 100% 0 0

Chromosomal Locations for CCDS 56443.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 89566977 89567096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89595916 89596014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89603029 89603127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89612272 89612370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89613792 89613890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89616559 89616657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89621922 89622026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89623410 89623544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89623872 89624057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89624539 89624691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89627583 89627696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89629112 89629223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89630433 89631004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1992 nt):
ATGAGCCAGCAAGATGCGGTCGCTGCACTTTCAGAGCGCCTTCTCGTAGCTGCGTACAAAGGCCAAACAG
AGAATGTGGTTCAGCTCATCAACAAGGGCGCCAGGGTAGCGGTTACCAAGCATGGCCGGACTCCCCTGCA
TCTTGCTGCCAATAAGGGCCATCTTCCTGTGGTCCAGATCTTGCTGAAGGCTGGCTGCGACCTTGATGTC
CAGGATGATGGGGACCAGACCGCCTTGCACCGGGCCACAGTGGTGGGGAACACGGAGATCATCGCGGCGC
TCATCCACGAAGGGTGTGCCCTGGACAGACAAGACAAGGCGGGGAACACAGCTCTGCACCTGGCCTGCCA
GAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGCTGGCCGGGTCCCGCGCTGACCTCAAAAATAATGCA
GGAGACACCTGTTTGCACGTTGCTGCGCGCTATAATCACTTGTCCATCATTAGGCTCCTCCTCACTGCTT
TCTGTTCTGTCCATGAAAAGAACCAGGCTGGAGACACAGCACTTCACGTTGCTGCTGCCCTAAATCACAA
GAAGGTGGCCAAAATCTTACTGGAAGCCGGAGCAGATACGACCATTGTTAACAATGTCTTGCGCTTCAGT
CGTGGGCGAAGCCTGAGGAAAAAGAGAGAGAGGCTCAAGGAAGAGAGGAGAGCCCAGTCTGTGCCAAGAG
ATGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCCAGCAGTGAACAGGCTGTGGCCAG
AAAAGAAGAAGCCAGAGAAGAGTTCCTGTCAGCCTCCCCAGAACCCAGAGCAAAGGATGACAGGAGGAGA
AAGTCAAGGCCCAAGGTGTCAGCATTTTCTGACCCCACCCCACCAGCCGACCAACAGCCTGGACACCAGA
AGAACCTGCATGCTCATAATCACCCTAAAAAGAGGAACAGGCATCGGTGTTCATCCCCACCCCCACCCCA
TGAGTTCAGGGCGTATCAGCTCTACACATTGTACCGGGGCAAGGATGGGAAAGTGATGCAGGCACCAATA
AATGGTTGTCGATGTGAACCTCTAATCAACAAGCTGGAGAATCAGTTGGAGGCTACTGTGGAGGAGATAA
AAGCAGAGCTGGGATCGGTTCAGGACAAAATGAATACAAAGCTGGGGCAGATGGAGAATAAGACCCAGCA
CCAAATGCGTGTTTTGGACAAGCTGATGGTTGAGCGACTTTCTGCAGAGAGGACGGAGTGCCTGAACCGC
CTGCAACAGCACTCAGACACAGAGAAGCATGAGGGGGAGAAACGACAGATATCCTTGGTGGATGAATTAA
AAACCTGGTGCATGTTAAAGATTCAGAATCTGGAGCAGAAGCTTTCTGGAGATTCTAGGGCCTGCAGAGC
TAAATCCACACCATCTACTTGTGTGGACCAATTAGTGGTGACTGCAGGTCCAGCAGCAGCTTCCGACAGC
TCCCCTCCAGTGGTTAGGCCCAAAGAGAAGGCCCTCAACTCCACTGCTACCCAGAGACTCCAGCAGGAGC
TGTCGTCTTCTGACTGTACAGGCTCCCGACTGAGAAACGTCAAGGTCCAGACAGCCTTGCTACCCATGAA
TGAGGCAGCCAGATCTGATCAGCAGGCTGGGCCCTGCGTCAACAGAGGCACTCAAACTAAGAAGTCTGGG
AAGAGTGGGCCAACAAGGCATCGTGCCCAGCAACCCGCAGCCAGCAGCACCTGTGGGCAGCCGCCACCAG
CCACAGGCAGCGAGCAGACTGGCCCTCACATTCGGGACACCTCCCAAGCTCTGGAGCTTACCCAGTATTT
TTTTGAGGCTGTTTCTACCCAGATGGAAAAGTGGTATGAAAGGAAGATTGAAGAAGCACGAAGCCAAGCC
AATCAGAAAGCCCAGCAAGATAAGGCTACATTGAAGGAACACATTAAAAGTTTAGAAGAGGAACTTGCCA
AACTAAGGACTAGGGTGCAGAAGGAAAATTAG

Translation (663 aa):
MSQQDAVAALSERLLVAAYKGQTENVVQLINKGARVAVTKHGRTPLHLAANKGHLPVVQILLKAGCDLDV
QDDGDQTALHRATVVGNTEIIAALIHEGCALDRQDKAGNTALHLACQNSHSQSTRVLLLAGSRADLKNNA
GDTCLHVAARYNHLSIIRLLLTAFCSVHEKNQAGDTALHVAAALNHKKVAKILLEAGADTTIVNNVLRFS
RGRSLRKKRERLKEERRAQSVPRDEVAQSKGSVSAGDTPSSEQAVARKEEAREEFLSASPEPRAKDDRRR
KSRPKVSAFSDPTPPADQQPGHQKNLHAHNHPKKRNRHRCSSPPPPHEFRAYQLYTLYRGKDGKVMQAPI
NGCRCEPLINKLENQLEATVEEIKAELGSVQDKMNTKLGQMENKTQHQMRVLDKLMVERLSAERTECLNR
LQQHSDTEKHEGEKRQISLVDELKTWCMLKIQNLEQKLSGDSRACRAKSTPSTCVDQLVVTAGPAAASDS
SPPVVRPKEKALNSTATQRLQQELSSSDCTGSRLRNVKVQTALLPMNEAARSDQQAGPCVNRGTQTKKSG
KSGPTRHRAQQPAASSTCGQPPPATGSEQTGPHIRDTSQALELTQYFFEAVSTQMEKWYERKIEEARSQA
NQKAQQDKATLKEHIKSLEEELAKLRTRVQKEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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